Conserved Protein Domain Family
ABC_ModC_like

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cd03299: ABC_ModC_like 
ATP-binding cassette domain similar to the molybdate transporter
Archaeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Statistics
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PSSM-Id: 213266
Aligned: 10 rows
Threshold Bit Score: 348.556
Created: 4-May-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:Walker A, Walker B, Q-loop, D-loop, and H-loop form the nucleotide binding site

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                       ## ###                                     #  
NP_276057   4 LDIDNLEIDlgefvVRVDELHLSRgDYLVIIGPTGSGKSIFLETIMGFFEPISGTISLDGADLTtlPPEERDVSIVYQDH 83  Methanothermobacte...
NP_987624   2 LVIENLRKNlsnfeLYIEKLEVKNsDYFVFLGLSGSGKTTILEMIAGFIKPDSGKIMLNGVDITn-KPINERKIVLCNGK 80  Methanococcus mari...
NP_988769   4 VKIENLNINlgefkLEDVNLSVEKgDYVTIIGPTGSGKSILLETALGFYTPETGKIFLEETDITnlNPEKRDISIIYQDY 83  Methanococcus mari...
NP_615255   2 IEIESLSRKwknfsLDNLSLKVESgEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTdlSPEKHDIAFVYQNY 81  Methanosarcina ace...
CAF31074    2 LKLENLCKSwkefqLKSVNLEIEN-NYCILLGPSGAGKSVIIQCITGILKPDSGKIYFNGEDITemPPEKRNFGYVPQNY 80  Methanococcus mari...
NP_068933   3 LKVRAEKRLgn--fRLNVDFEMGR-DYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITplPPERRGIGFVPQDY 79  Archaeoglobus fulg...
Q58762      2 LKVNNLSKIwkdfkLKNVSFEIDR-EYCVILGPSGAGKSVLIKCIAGILKPDSGRIILNGEDITnlPPEKRNVGYVPQNY 80  Methanocaldococcus...
NP_142160   2 LKVESISKDyrefkLREISFDVREgEHFIILGPSGSGKTVLLEIIAGIISPDRGRILLRGEDITglPPEKRNFSYIPQNY 81  Pyrococcus horikos...
NP_577811   2 LEVQGISKKwkdfhLKDISFSVMDgEYFIVLGPSGAGKTVLLEIIAGIIPPDGGKVLLDGKDITllPPEKRGIAYVPQNY 81  Pyrococcus furiosu...
NP_633602   4 LEVRDLCLDvgdfeLSGIGLKAEKgDYLALIGPTGSGKSLLLETIIGFYGPEKGRIILEGKDITnfPPDMRQISIVYQDH 83  Methanosarcina maz...
Feature 1                                                                              ##     
NP_276057  84 CLFPHMTVEENIAYGLrkqtemkeNIHRQVHEIAAMMGIDHVLNRYPGTLSGGELQRASIARAIIVNPRLLLMDEPFSAL 163 Methanothermobacte...
NP_987624  81 YLFPHLTIQKNIEYGIkhl--kkpEKKEKVDNISKLLNITHLLNRKPERLSSGEQQRVALAMALVMEPEIILLDEPLSSL 158 Methanococcus mari...
NP_988769  84 ALFPHMTVYENIEYGLkkrlndkkTIKEEIIQITKMLGIDHLLNRKPETLSGGEMQRASIARGLIIKPKILFMDEPFSAL 163 Methanococcus mari...
NP_615255  82 SLFPHMNVKKNLEFGMrmk---kiKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSAL 158 Methanosarcina ace...
CAF31074   81 ALFPNMNVYNNIAYGMklrkyskaEIEKKVMEISEFLHISHILDRKPTTLSGGEQQRVAIARALVLDPKILLLDEPTSAL 160 Methanococcus mari...
NP_068933  80 ALFPHLSVYRNIAYGLrnv--ervERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAV 157 Archaeoglobus fulg...
Q58762     81 ALFPNKNVYKNIAYGLiikkvnklEIDRKVKEIAEFLNISHLLNRDVKTLSGGEQQRVALARALILNPSILLLDEPTSAV 160 Methanocaldococcus...
NP_142160  82 ALFPHMTVFDNIAFGLklrkiprkEVARKVREVAESLGIDHLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANL 161 Pyrococcus horikos...
NP_577811  82 ALFPNMSVFDNIAFGLkvrrvprsEIEKRVLEISEVLGIRHLLHRKPRTLSGGEQQRVAVARALVIEPEIILLDEPFANL 161 Pyrococcus furiosu...
NP_633602  84 VLFPHMDIFENIAYALrkklrdkkQIEAEVKQIAGVLGIGELLHRKPATLSGGEKQRAAIARSLVVRPKLLLLDEPFSAL 163 Methanosarcina maz...
Feature 1                                #                                               
NP_276057 164 DQRTKISLRKLIADIRdnfetTVIHVTHDLDDIWWLSNKVAVMNHGKIIQMGkkeevINKPSPYFVADFLGANIL 238 Methanothermobacter the...
NP_987624 159 DRLLHEKLMYDLKEVHkssnvTFIHVTHDFSEAAVLSNKMAILRNGKIEHIGtlqnvLKHPQNEFVAKFVGIKNI 233 Methanococcus maripalud...
NP_988769 164 DVKTKEKIRVLVKTAIkkygtTVLHVTHDFEDIWSLADKVLIMKGGRVYQYGtpeevFSNPSSEIVADFVGTNIL 238 Methanococcus maripalud...
NP_615255 159 DPRTQENAREMLSVLHkknklTVLHITHDQTEARIMADRIAVVMDGKLIQVGkpeeiFEKPVEGRVASFVGFENV 233 Methanosarcina acetivor...
CAF31074  161 DTNIKESVISELKKIGel--vPVIHITHDFVEAKTLGNQIAILINGELNDFGnq-giFKTPKNEKIANFLGYNII 232 Methanococcus maripalud...
NP_068933 158 DLKTKGVLMEELRFVQrefdvPILHVTHDLIEAAMLADEVAVMLNGRIVEKGkl-keLFSAKNGEVAEFLSARNL 231 Archaeoglobus fulgidus ...
Q58762    161 DIKIKESIISELKKIKh---iPVLHITHDLAEARTLGEKVGIFMNGELIAFGdk-siLKKPKNKKVAEFLGFNII 231 Methanocaldococcus jann...
NP_142160 162 DVQTKSKLIREMKRWRkefgfTAIHVTHSFEEALSLGDRVGIMLRGRLVQVGdvrdvFSKPKSEEVARFLGFENI 236 Pyrococcus horikoshii OT3
NP_577811 162 DVQIRSRLINEMKRWRrelgfTAIHVTHSFEEALALGDRVGIMLNGKLVQVGeirevFSRPNSEEVAKFLGFENI 236 Pyrococcus furiosus DSM...
NP_633602 164 DARTKEKLREMLKKAIseystTVLHVTHDFEDVWALANRVVVIRKGEVMQAGdpesvFKRPSPDFVAEFLGTNVL 238 Methanosarcina mazei Go1

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