Conserved Protein Domain Family
ABC_UvrA_I

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cd03270: ABC_UvrA_I 
ATP-binding cassette domain I of the excision repair protein UvrA
Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Statistics
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PSSM-Id: 213237
Aligned: 25 rows
Threshold Bit Score: 239.082
Created: 18-Mar-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_281189      6 IEVRGAEEHNLTDLDVELPRESLNVVTGLSGSGKSSLAFETIYAEGQRRYIESLSAYARnflgqmdkPQVESVEGLSPAI 85   Halobacterium ...
NP_868118      8 IIVKGAREHNLRDVDLTLTRGELICFSGVSGSGKSSLAFDTLYAEGQRRYVESLSNSARqfmgqmpkPDVDLVTGLSPSI 87   Rhodopirellula...
NP_869661     10 IRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYIDSLSTYARqyldaiprPDVDWIDGLAPTL 89   Rhodopirellula...
P52087        21 VQVRGAREHNLKDVHLDIPRNALVVFTGISGSGKSSLAFGTLYAEAQRRYLESVSPYARrlfhqmsvPEVDSIEGLPPAI 100  Paucimonas lem...
Q9PK60         5 VRLSGITVRNLKNVTVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYITTLPSFFAtrihslpdPAVKKVEGLSPTV 84   agent of mouse...
YP_008640      7 IVLKKVRVHNLKTVDLTLEKNELIVFTGVSGSGKSSLAFDTIYTEGQRRYVESLSTFARrqlgelskPDLEHASGISPTI 86   Parachlamydia ...
CAE17542      15 IEVVGANTHNLRNVSVTIPKNRIVAFTGVSGSGKTSLAIDTIHAEAQLRYLNGISPFFRqfispkdrPQVDRIAGLGVTL 94   Streptomyces g...
NP_348092     10 INVIGARERNLKNVNVKIPKRKITIFTGVSGSGKSSLVFDTIAAESQRQLNETYSSFIRhrlphygePKVDAIENLSVAI 89   Clostridium ac...
ZP_00355972    4 IRIRGARTHNLKQIDLDIPRGKLVAITGVSGSGKSSLAFDTIFAEGQRRYVESLSVYARqllgqiekPDVDLIEGLSPAI 83   Chloroflexus a...
O51777         9 IIVRGAKEHNLKNVDVDIPKDGLVVISGKSGSGKSSLAFDTIFAEGQRRYMESVSAYARqflgvmkkPNVDYIDGLSPSI 88   Lyme disease s...
NP_281189     86 SIDQKNAANNPRSTVGTVTELHDYLRLLYARVGtphcpecgrevgeqsaqqmvrrifdlpagtkakllapvvrdqkgafe 165  Halobacterium ...
NP_868118     88 SISQKSTGNNPRSTVGTITEIYDFLRVLYARVGtghcpacdveiaaqttdvivnrllelasdgwqdeqssedsdteaaie 167  Rhodopirellula...
NP_869661     90 SIDQKSGSHSARSTVATITEIYDYLRLLYARVGvphcvacgstistqtpdrivatlatlpdrtkltlmspmvrgrkgaha 169  Rhodopirellula...
P52087       101 ALQQQRGAPTTRSSVGSITTLSNSLRMLYSRAGnypkgqdilyaesfspntpegacptchglgrvyevteqsmvpddskt 180  Paucimonas lem...
Q9PK60        85 AVKQNFFAQHVHATVGSTTEINSYLALLFSLDGqaydpitlrpltlyskekilaeiaaipdgtqltllaplpagdilrvr 164  agent of mouse...
YP_008640     87 SIEQKTAGKNPRSTVGTLTEIYDYLRVLYARIGiphcpvsgeavtpqsreriiksvqnlppktkiiilapyakakkaefk 166  Parachlamydia ...
CAE17542      95 AVDQRRLNRSPRSTLGSITGLNDFLGLLFARMPalgpeavefpelrgltsayfdrysmegrckkcaglgyvvtpaedriv 174  Streptomyces g...
NP_348092     90 IIDQKRIGGNSRSTVGTITDIYSLLRLLFSRIGnpfvgysdvfsfnnikgmctkceglgkvdmisidklldknkslnega 169  Clostridium ac...
ZP_00355972   84 AIDQKGSARNPRSTVGTVTEIYDFLRLLFARIGqphcpqcrsplrrytpqqmvdvivnlpvgrrvlllapltgesesvls 163  Chloroflexus a...
O51777        89 AIEQRTISNNPRSTVGTITEIYDYYRLIFAKIGkaycpndgrlieeqsldkivntilsysegskvilfapivrgskgshk 168  Lyme disease s...
NP_281189    166 dlfedlvnegysrvavdgesydlayddpdldenydhtvdvvvdrvtvtedarsritdsvetaldeadgvlkvvvpdagpd 245  Halobacterium ...
NP_868118    168 dgtlwvmaplvrgqkgefrdlfedlrkqgfnrarvdgetfrlsdpppldrtrrhdvevvidrivadqierprlieavela 247  Rhodopirellula...
NP_869661    170 dvleqiaghglvrarvdgemylledvpplavrknhtieaivdrliikdgvdarldestrlalrlaggmcsalid------ 243  Rhodopirellula...
P52087       181 ireraiaawppawhgqnlrdilttlgydidipwrdlpkkdrkwilfteeqpvvpvyagftldevrha------------- 247  Paucimonas lem...
Q9PK60       165 eclrqgftkilidgeispihkflatgvpvpsqliidtliknasntprlkvslfttldighgecclhfdnqkrvfstqttl 244  agent of mouse...
YP_008640    167 edfqelirkgfmrarvdghfvnltdeltldgnvthdvdvvidrltiennalsriadsltqalqlgqgvcsildaeskneq 246  Parachlamydia ...
CAE17542     175 trpdlplragagewferansgeylalpalaerygadldrpwrelpeafrhavlhgtgdeavsyk---------------- 238  Streptomyces g...
NP_348092    170 ilfptfepggwrlkryiysgffdndkkikdfteeemelllyksdikvtts------------------------------ 219  Clostridium ac...
ZP_00355972  164 eirrrgfvraridgtvydldepvrlekyqphtieaivdrliirqttdgtpaldrvrvadsvetalklsggqlivqvidgd 243  Chloroflexus a...
O51777       169 kvlekilnqgfnrvrinsedyliedalnlnlhknkkhtieiivdriklgnnvrvrlaesietslavsngylrveidndle 248  Lyme disease s...
NP_281189    246 telggatarstgdladdaaddrlvvefsdalacthcgidiseietrsfsfnsphgac----------------------p 303  Halobacterium ...
NP_868118    248 lklgessliasvgppngedvppvrhdqlfsskyscgncgrsfrpptpqlfsfnspqgmcascdgigrlytfvpellipde 327  Rhodopirellula...
NP_869661        --------------------------------------------------------------------------------      Rhodopirellula...
P52087           --------------------------------------------------------------------------------      Paucimonas lem...
Q9PK60       245 petqntytplspdlfsshshkdrcpqchgsgifvsindp----------------------------------------- 283  agent of mouse...
YP_008640    247 lfsmhayspqsglsysslephdfsfnspsgmcprcqgmgnihefnl---------------------------------- 292  Parachlamydia ...
CAE17542         --------------------------------------------------------------------------------      Streptomyces g...
NP_348092        --------------------------------------------------------------------------------      Clostridium ac...
ZP_00355972  244 eyllserytcpqhgpldlgqleprdfsfnspqgscptctglgivpefdpa------------------------------ 293  Chloroflexus a...
O51777       249 kidklftehnscplcgfslplieprlfsfnspfgacsecsglgvtlefdf------------------------------ 298  Lyme disease s...
NP_281189    304 ecegigntkevsedlvvvdtskpikdvfeawsyqrsyyrtrldavaahfgvsvdtpfdelddavqqaflygtsdevvfer 383  Halobacterium ...
NP_868118    328 slsirkgaiallgkwgdlgryrrhiyrgvadamdaelelepgtmletrwdklpeiarhiwlwgaddsmqftwrggrkakk 407  Rhodopirellula...
NP_869661    244 ---------------------------------------------------------------rgdgepetklfstsmtc 260  Rhodopirellula...
P52087       248 ----------------------------------------------------------------------lkrketpsyq 257  Paucimonas lem...
Q9PK60       284 -----------------siiqqnlsieknccpfagscsillyktiyqsladnlgfslstpwqdlspeiqhiflygkegls 346  agent of mouse...
YP_008640    293 -----------dlvidpnlsiannccsiaspyqtvrygniydnlaeqyhfsvntpwknlsasarkvylfgtekkwtrmhf 361  Parachlamydia ...
CAE17542     239 -------------------------------------------------------------------------ivskqkk 245  Streptomyces g...
NP_348092        --------------------------------------------------------------------------------      Clostridium ac...
ZP_00355972  294 -------lvipdrslplleaiapwregdansqryyrdmvrsfanhfgidptapvsslspeclsallygtggepitlhyhv 366  Chloroflexus a...
O51777       299 -------esicpdtslsfnddafltfktssswsvaifkglakhynfdlntpikdipdkvlkqilygsnekidfiyqskem 371  Lyme disease s...
NP_281189    384 stkngtrrkekrfegvipnlerryvetdsestrdhietymsvttcpacdgtrlkpssravlvdgtpitdvnrmsigdala 463  Halobacterium ...
NP_868118    408 yvgnfegfipelldryrtsrnkmqlrqfekymntmdcpdchgkrlndqacavristgskdfaeskskslpelcelsidsl 487  Rhodopirellula...
NP_869661    261 lecgesfeeleprtfsfnspygacpacqglgkvavrgdkshmvtcstceggrlkaeslavtihdvsidamcrmplpdaqs 340  Rhodopirellula...
P52087       258 gtftsarkyvldtfantespamkkrvsqymvgkectlcqgkrlrpeslavtfagyditelsrlplkhlatllhpyaqent 337  Paucimonas lem...
Q9PK60       347 lpvklfdgtlgkttqthkqwkgvlneigekirfankpsrylpkgtsytecprcqktglsdyanaakwhgksfadlqqmsl 426  agent of mouse...
YP_008640    362 vhpitgarwtdhiqwkgvlhdahtrfseaksenyrkkmqkvmsiqicpecegtrlkpypaatllggqriskltsmtifdc 441  Parachlamydia ...
CAE17542     246 sgtetviersvplkgavfevsrlyeaaasdsskenyarfmrrqdcegcagsgfgdvprtlkvagltypeivrmpiedlrd 325  Streptomyces g...
NP_348092    220 -------dpnwpktslyeglipriersflkkeegeaikykkqiskivsretcpickgarlnndvlkckinnkniwdcsem 292  Clostridium ac...
ZP_00355972  367 ngqprsleaefegvipnlrrrlagqgadgdssvleqyttpracpacagtrlraevrailiagrsiadvhqmtigeafawa 446  Chloroflexus a...
O51777       372 eakeldggfhysktfegllpllkrrylatesestkifyenlmskkicnsckgkrlsvgaltvkingkdiqdltnlsvfds 451  Lyme disease s...
NP_281189    464 hfegmeaeldardtkiaaeilkeIRARLGFMTEVGLEYLTLDREASTLSGGESQRIRLATQIGSGLVGVLYVLDEPSIGL 543  Halobacterium ...
NP_868118    488 meffgdiplsktdtqiagealkeIRGRIGFLLGVGLEYLTLGRTAPTLSGGESQRIRLAGQIGSGLSGVLYILDEPSIGL 567  Rhodopirellula...
NP_869661    341 wmenvakpldalqqkvaapiqseVVRRIDFLRRVGVDYLTLDRSAETLSGGEMQRVRLATSIGSGLVGVCYVLDEPSIGL 420  Rhodopirellula...
P52087       338 pdwdklaaknpekaivtqriaedLSNRLSVLLSLGLGYLTLERSTPTLSPGELQRLRLATQVHSNLFGVVYVLDEPSAGL 417  Paucimonas lem...
Q9PK60       427 qelfiflnqlppkdpaieeviqgLKARLAMLIDLGLPYLSPERSVNTLSGGEQERTALAKHLGAELMGVTYVLDEPSIGL 506  agent of mouse...
YP_008640    442 svffenlklspqdsliagellkeIRQRLQFLLEVGLHYLTLERTAPTLSGGEAQRVRLASQIGCGLVGITYILDEPSIGL 521  Parachlamydia ...
CAE17542     326 wvatvdatltpmqrevavnllpdLGRRVRLMVELGLGHLRVTRSAPSMSGGELQRARVTAQLNMDLTGIIFVLDEPSAGL 405  Streptomyces g...
NP_348092    293 qtidllnfirgvydpkgitivneIVNRLEQLVSIGLGYLSLSRETSTLSGGESQRIKMVRQLSSSLTDLTYIFDEPSVGL 372  Clostridium ac...
ZP_00355972  447 swlleqaqlsprdqtiarpivheITQRLRFLQEVGLAYLTLDRTTMTLSGGEMQRVRLATQLGAGLSGVLYVLDEPSSGL 526  Chloroflexus a...
O51777       452 yvffenlqldmvdekiskeilkeIKSRLKFLIDVGLSYLYLNRISGSLSGGEAQRIRLATQIGSALSGVIYVLDEPSIGL 531  Lyme disease s...
NP_281189    544 HQRDNDRLLNTLEELRDLGNTLIVVEHDEETMRRADTVIDMGPGPGRHGGEVVANG 599  Halobacterium salinarum NRC-1
NP_868118    568 HPRDNDRLITTLTRLRDAGNTLIVVEHDEDTMRAADTIVDFGPGPGVKGGHIVAAG 623  Rhodopirellula baltica SH 1
NP_869661    421 HPADHHRLLAAIKELQTAGNTIVIVEHDEDTIQAADHVIDIGPGAGRHGGRLVSQG 476  Rhodopirellula baltica SH 1
P52087       418 HPADTQALLAALDRLKQAGNSLFVVEHALGVIRHADWIVDVGPEAGEHGGRILYSG 473  Paucimonas lemoignei
Q9PK60       507 HPQDTYKLMDVIKKLRDQGNTILLVEHDEQMISLADRVIDVGPGAGIFGGEVVFNG 562  agent of mouse pneumonitis
YP_008640    522 HPRDNRKLIDTLKHLRDMGNTVIVVEHDEETIWEADRIVDFGPGAGVKGGRILVNG 577  Parachlamydia sp. UWE25
CAE17542     406 HPADKHPLREILHALRDAGNTVLLVEHDPELIALADWVVDLGPGAGREGGTLVASV 461  Streptomyces griseus subsp. griseus
NP_348092    373 HPHDIDKINILLKLLRDKGNTVLIVEHDPDIIKIADHVVDMGPKAGVNGGKIMYEG 428  Clostridium acetobutylicum ATCC 824
ZP_00355972  527 HPRDHDRLLATLFHLRDLGNSLVVVEHDEATIRAADWIVDIGPGAGPRGGEVVVNG 582  Chloroflexus aurantiacus
O51777       532 HQRDNEKLISTLVNLKNLGNTVIVVEHDEQTLRTADYIIDMGPGAGILGGEIVAKG 587  Lyme disease spirochete
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