Conserved Protein Domain Family
ABC_Org_Solvent_Resistant

?
cd03261: ABC_Org_Solvent_Resistant 
ATP-binding cassette transport system involved in resistance to organic solvents
ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Statistics
?
PSSM-Id: 213228
Aligned: 41 rows
Threshold Bit Score: 330.233
Created: 13-Dec-2004
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
  next features
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:Walker A, Walker B, Q-loop, D-loop, and H-loop form the nucleotide binding site

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                            ## ###                                     
ZP_00052046  19 IRVRDLVVGFGhr--tVMKGLDLDIRRGEILGFVGPSGQGKSVLTRTILGLVPKRSGTIEIFGedvdgltlarrrqleqr 96  Magnetospirillum...
NP_970512     2 IEFKNLVKRFGtr--tVLNGLNLKIREGEIIFILGTSGTGKSVLLKNIVGLLTPDEGEIWIDEeevskfseeqylpirkk 79  Bdellovibrio bac...
NP_952280    28 IRIENLNKYFGek--hVLKDVNLAINAGETFCIIGPSGTGKSVLLRHIVKLDRPDSGEIFIDGhpvfvnag-kdtpsdyr 104 Geobacter sulfur...
NP_906376     2 LELKGVAKSFGak--kVLTDITLEAKEGKTTVIFGLSGSGKSTIIKLIVRLLEPDGGDILLHNesilsaspkrlyelrke 79  Wolinella succin...
ZP_00211211   4 ISLSDLHIDFRgh--qVLKGISLDIAYGESLVIVGESGSGKSVLTKTILGLIAPTSGKVVISGvdirhd-----kslikn 76  Ehrlichia canis ...
NP_812750     2 IDIRGLYKSFEdk--tVLSNINASFENGKTNLIIGQSGSGKTVLMKCIVGLLTPEKGEVLYDGrnlvlmgkkekkmlrke 79  Bacteroides thet...
YP_101361     2 IEVKGLYKSFEgk--tVLHNIDATFENGKTSLIIGQSGSGKTVLMKCIVGLLTPEKGEVLYDGrnflamgkkekkhlrre 79  Bacteroides frag...
YP_066023     6 IEFIDVEKSFGdn--hVLRGVSLSIYRGEITVIIGKSGCGKSVLLKHIIGLMQQDSGLIKFEGkctddmtrseqrtfrkk 83  Desulfotalea psy...
ZP_00307747  15 ISIKGLYKSFGel--hVLKGIDLEVHKGENVVVLGKSGTGKSVLIKILVGLLKPDAGVVQVLGkevdklnqkeldalrlh 92  Cytophaga hutchi...
NP_969888     7 ISLRDVKKSFDgghefVLKGINLEIPKGSLTAIIGFSGTGKSVMLKHLLGLFKPTSGTIEVLGtdlstlnpdqltkfrcn 86  Bdellovibrio bac...
Feature 1            #                                                                          
ZP_00052046  97 WGVLFQQGALFSGLTVKQNIQMPMREHlklser-lldefARLKIEMVGLkpda-adkyPSELSGGMIKRAALARSLALDP 174 Magnetospirillum...
NP_970512    80 CGMVFQHPALFDSLTIYENVAFGLRRHyqlsee-viqakVSKALRLVNLhgve--qkrPGQISYGMQKRVSLARTVALEP 156 Bdellovibrio bac...
NP_952280   105 YSMVFQSSALFNSLTVGENVGLWLREKrickeh-rireiIREKLAMVGLente--qlkTSELSGGMKKRVAIARSLAMNP 181 Geobacter sulfur...
NP_906376    80 IGFLFQSGALFDSKNVYENVAFPLREHtrlser-eirakVLSRLEMVGLkpdevallyPDELSGGMKKRVGLARSIILDP 158 Wolinella succin...
ZP_00211211  77 FGVLFQNCALFDSLTVCENIAFNLHYRfnrdrs-lsrkiAASGLNLVGLgddv-ldryPIELSGGMKKRIALARAIVSEP 154 Ehrlichia canis ...
NP_812750    80 MGMIFQSAALFDSMSVLDNVMFPLNMFsndtlr-drtkrAMFCLERVNLteak--dkfPGEISGGMQKRVAIARAIALNP 156 Bacteroides thet...
YP_101361    80 MGMIFQSAALFDSMSVLDNVMFPLNMFgtdtlr-eqtkrAMFCLDRVNLteak--dkfPGEISGGMQKRVAIARAIALNP 156 Bacteroides frag...
YP_066023    84 FSYMFQDNALFDSLTIFQNIALPLSEKglfske-siagkVNEIMTTLEIeqta--ssyPAELSGGMKKRVALARALITKP 160 Desulfotalea psy...
ZP_00307747  93 IGFAFQSSALYDSMDVRQNLEFPLLMNfknlskaevkdsVEEVLDAVGLidkl--nqmPSDLSGGQRKRIGIARTLILKP 170 Cytophaga hutchi...
NP_969888    87 FGVLFQSAALFDDMTVLENVCFPLFEHrrelkpaqvlriAEEKLHQVGLeskh-yhklPSQISGGMQKRTGLARALALDP 165 Bdellovibrio bac...
Feature 1            ##                                 #                                       
ZP_00052046 175 EILFLDEPTSGLDPIGAGEFDDLVSTLKkt-lGLTVFMVTHDLDSLYTACDRIAALGDGRIIAEGTIDEMLASDHPWLRS 253 Magnetospirillum...
NP_970512   157 RILLFDEPTTGLDPVTTTAVNQLILDLSre-lKTTSLVVSHDMNCALSIADRIVVLDKGNIVALGTPDELKKSDQPLVKD 235 Bdellovibrio bac...
NP_952280   182 DLILYDEPTAELDPVTTDELANTILKLKet-tKNTTIIVTHDLNFALYVSDRIAMMHDGRIVDVGTPTEIKASQNPIVRG 260 Geobacter sulfur...
NP_906376   159 KVILYDEPTSGLDPITSDLITQMIIHLQke-lQTTSILISHDLKESFKAADYMAMLFEGRIIECSSKEQFAKSENPRVRQ 237 Wolinella succin...
ZP_00211211 155 KIMILDEPTSGLDPIMSDVVNEIIIKCHke-fNLTVITITHDISSAFKIASKIAVLYNGKIIACESVQDIRNIDNQYVKN 233 Ehrlichia canis ...
NP_812750   157 QYLFCDEPNSGLDPKTSLVIDDLIHDITqe-yNMTTIINTHDMNSVLGIGEKVIYIYEGHKEWEGTKDDIFTSTNERLNN 235 Bacteroides thet...
YP_101361   157 QYLFCDEPNSGLDPKTSLVIDDLIHDITre-yNMTTIINTHDMNSVMGIGEKIIYIYQGTKEWEGTKDDIFTSTNEQLNN 235 Bacteroides frag...
YP_066023   161 EIILFDEPTTGLDPVRKNKVHQMIRDYKdv-fGFTGVVVSHEIPDIFEISQRIVMIDQGKTVIEGTLDELVQFDSDLVKS 239 Desulfotalea psy...
ZP_00307747 171 KIMLYDEPTSGLDPITSFEINELINEVQek-yNTSSIIITHDLTCAKETCDRVAMLLDGTFVKTGTFEEVFEDQDERIQS 249 Cytophaga hutchi...
NP_969888   166 EILIYDEPTTGLDPILTEMVDNLILSTHklkqGVTSIMVSHDLSAAFRIADHIAMLDSGRVLLFGTPEDFFNTDIELVKK 245 Bdellovibrio bac...
Feature 1        
ZP_00052046 254 Y 254 Magnetospirillum magnetotacticum MS-1
NP_970512   236 F 236 Bdellovibrio bacteriovorus HD100
NP_952280   261 F 261 Geobacter sulfurreducens PCA
NP_906376   238 F 238 Wolinella succinogenes DSM 1740
ZP_00211211 234 F 234 Ehrlichia canis str. Jake
NP_812750   236 F 236 Bacteroides thetaiotaomicron VPI-5482
YP_101361   236 F 236 Bacteroides fragilis YCH46
YP_066023   240 F 240 Desulfotalea psychrophila LSv54
ZP_00307747 250 F 250 Cytophaga hutchinsonii
NP_969888   246 F 246 Bdellovibrio bacteriovorus HD100

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap