1V40,1YQ1,2ON5,2WS2,1ZL9,1M0U,1GSF,1K3Y,1TW9,1M0U,1GSQ,4GTU,3H1N,1Q4J,1PD2,2HNL,1GSU,1XWK,1TU8,2WB9,1OE8,13GS,2PGT,1U3I


Conserved Protein Domain Family
GST_C_Sigma_like

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cd03192: GST_C_Sigma_like 
Click on image for an interactive view with Cn3D
C-terminal, alpha helical domain of Class Sigma-like Glutathione S-transferases
Glutathione S-transferase (GST) C-terminal domain family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation, and mediation of allergy and inflammation. Other class Sigma-like members include the class II insect GSTs, S-crystallins from cephalopods, nematode-specific GSTs, and 28-kDa GSTs from parasitic flatworms. Drosophila GST2 is associated with indirect flight muscle and exhibits preference for catalyzing GSH conjugation to lipid peroxidation products, indicating an anti-oxidant role. S-crystallin constitutes the major lens protein in cephalopod eyes and is responsible for lens transparency and proper refractive index. The 28-kDa GST from Schistosoma is a multifunctional enzyme, exhibiting GSH transferase, GSH peroxidase, and PGD2 synthase activities, and may play an important role in host-parasite interactions. Members also include novel GSTs from the fungus Cunninghamella elegans, designated as class Gamma, and from the protozoan Blepharisma japonicum, described as a light-inducible GST.
Statistics
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PSSM-Id: 198301
Aligned: 83 rows
Threshold Bit Score: 53.7806
Created: 24-Oct-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
dimer interfacesubstrateN-terminal
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Comment:Residues from both N-terminal TRX-fold and C-terminal alpha helical domains form the dimer interface.
  • Structure:1PD2; Rattus norvegicus Prostaglandin D Synthase (class Sigma GST) dimer interface; contacts at 3.5A
  • Structure:1OE8; Schistosoma haematobium 28-KDa class Sigma GST dimer interface; contacts at 3.5A
  • Structure:1M0U; Drosophila melanogaster class Sigma GST-2 dimer interface; contacts at 3.5A
  • Structure:1K3Y; Human GSTA1-1 dimer interface; contacts at 3.5A
  • Structure:4GTU; Human GSTM4-4 dimer interface; contacts at 3.5A
  • Structure:13GS; Human GSTP1-1 dimer interface; contacts at 3.5A
  • Citation:PMID 9323136
  • Citation:PMID 1560466

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     # #   ##  ##  #                                                                 
1V40_D     82 MEQCHVDAIVDTLDDFMSCFPWaekkq----dvkeqMFNELLTynAPHLMQDLDTYLgg----rEWLIGmSVTWADFYWE 153 human
XP_781175  85 EDELLIDEAVETAEEILDYALPwiyreldekknaeiKKEYWDYh-GPRLLPFLEKRLegs--tsGFFVGdSLTVADLSVF 161 purple urchin
1GSQ_A     82 LEKYRVDEITETLQDIFNDVVKikfape---aakeaVQQNYEKs-CKRLAPFLEGLLvsngggdGFFVGnSMTLADLHCY 157 Japanese flying squid
1PD2_2     83 LEQCQVDAVVDTLDDFMSLFPWaeenq----dlkerTFNDLLTrqAPHLLKDLDTYLgd----kEWFIGnYVTWADFYWD 154 Norway rat
134261     84 MDMFKVDCLCDSLFELFNDYMAvynekd--aakkteLQKRFQNt-CLRVLPYMEKTLeankggaGWFIGdQILLCDMMTH 160 Sloane's squid
AAL23713   92 EGYYNIERMIGECEDVFKEFRSvflspa--dakeqvLKEAMETs-VPKLLNLISQSLses--agKFVAGcKVTLGDLCLL 166 Opisthorchis viver...
XP_793826  88 VEATRIDVACECIQDLVTPLMKmyfekde-akkaemGKAFVEKd-SVAILTAMSNSLmknsegkGYFVGdSMTLADIAIF 165 purple urchin
AAD17488   91 EEYYRVERMIGQCADLDKEFYTaffaaa--dqkeemLKKSMREa-VPKMLDLISKSIses--ggKFAAGdKVTLGDICLL 165 Clonorchis sinensis
2WB9_A     90 EEYYLIERIIGECEDLYREVYTifrtpq--gekeakIKEFKENn-GPTLLKLVSESLess--ggKHVAGnRITLGDLFLF 164 liver fluke
1OE8_B     90 EEYYNVEKLIGQAEDLEHEYYKtlmkpe---eekqkIIKEILNgkVPVLLDIICESLkas--tgKLAVGdKVTLADLVLI 164 Schistosoma haemat...
Feature 1                                 
1V40_D    154 ICSTTLLvfkpdl-ldnhpRLVTLRKKV 180 human
XP_781175 162 NAIDILSdcapee-ltsykKLLEHKAKI 188 purple urchin
1GSQ_A    158 VALEVPLkhtpel-lkdcpKIVALRKRV 184 Japanese flying squid
1PD2_2    155 ICSTTLLvlkpdl-lgiypRLVSLRNKV 181 Norway rat
134261    161 AALENPIqenanl-lkeypKLAALRTRV 187 Sloane's squid
AAL23713  167 ACLDHVDkadpeflkekypKLLEWREAV 194 Opisthorchis viverrini
XP_793826 166 NLFDGLFkhmppl-aekypTLKEFDERM 192 purple urchin
AAD17488  166 TSMDHVRkhdpeflgkhypKLLVLEQEV 193 Clonorchis sinensis
2WB9_A    165 TTLTHVMetvpgfleqkfpKLHEFHKSL 192 liver fluke
1OE8_B    165 AVIDHVTdldkefltgkypEIHKHRENL 192 Schistosoma haematobium

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