1A0F,1F2E,1N2A,2PMT,2DSA,2NTO,2X64


Conserved Protein Domain Family
GST_C_Beta

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cd03188: GST_C_Beta 
Click on image for an interactive view with Cn3D
C-terminal, alpha helical domain of Class Beta Glutathione S-transferases
Glutathione S-transferase (GST) C-terminal domain family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they are involved in the protection against oxidative stress and are able to bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs, contributing to antibiotic resistance. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH. One member of this subfamily is a GST from Burkholderia xenovorans LB400 that is encoded by the bphK gene and is part of the biphenyl catabolic pathway.
Statistics
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PSSM-Id: 198297
Aligned: 58 rows
Threshold Bit Score: 85.3764
Created: 23-Sep-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
dimer interfacesubstrateN-terminal
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Structure:1A0F; Escherichia coli class Beta GST dimer; contacts at 3.5A
  • Structure:2PMT; Proteus mirabilis class Beta GST dimer; contacts at 3.5A
  • Structure:1F2E; Sphingomonas paucimobilis class Beta GST dimer; contacts at 3.5A
  • Comment:Residues from both N-terminal TRX-fold and C-terminal alpha helical domains form the dimer interface.
  • Citation:PMID 9680481
  • Citation:PMID 9655824

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #  ##  #  #   #   #        #             #  #   #                               
1A0F_A     89 ISRYKTIEWLNYIATeLHKGFTPLFRPDtp---------eEYKPTVRAQLEKKLQYVNEALk------dEHWICGqRFTI 153 Escherichia coli
YP_269461  92 KNRALFFQWLMYLTNtVQAELMVCFYPQkhttn--vktvdNIIEAQEVRITEMFNLLDRELe------nKDFLVGnSISV 163 Colwellia psychrer...
YP_370800  91 PERAQFYKWLMWLTNtLQTTLIAYFYPErwvdvgnvagatQVKAHAEAKIAALLDQLERQLet----sgGPWLLGaHYTV 166 Burkholderia sp. 383
NP_934649 100 PTRPLFYQWLAFLNNtLQAELMVRYYPHrhtnd--eatipNVIAAQDERIADALSIINDQLe------hHEYLLGdTLTA 171 Vibrio vulnificus ...
YP_369226  89 PERPEWFEMMIYLANsVLPAMRNWFYAEkdgdp---rcaeMVKVFSRGQVEASMAHLDNLLsd-----gRTYLINdRLNT 160 Burkholderia sp. 383
AAK22246   71 PMRGQFLRWMTFIPAsIYSLFWVRDEPSrlggpd-pevqaRIKAATADRIADCWAMMESQLaplmdrhgGRYLLGdELGV 149 Caulobacter cresce...
AAV94613   89 PARGAILKWLFFASNtLHADMRMLFYPDkyiae---aqaeTLRAGLRPRLRTHLALLDAVAve-----aPDWLSPeAPSV 160 Silicibacter pomer...
YP_259416  88 SARAQVIRGLVYIAAnCYSAIGILDYPErwisdpdeplkaRVRAAAAERLYRSWGLFAEQFa------sRPYFGGaAPGA 161 Pseudomonas fluore...
YP_349465  86 ADRDQAIRGLVYIVSnCYAAIGIIDYPErwlvmpdeasrqNLMAGARERLHWSWEVFADQFs------aELYLDDeTPGA 159 Pseudomonas fluore...
AAY38095   88 AQRAQALRALVYIAAnCYAAIGIIDYPQrwlagsdddlerLLEAGARTRLHEHWETFADLFgd-----aGIWRCD-APGA 161 Pseudomonas syring...
Feature 1                                                       
1A0F_A    154 ADAYLFTVLRWAYA-VKLNLe-------gLEHIAAFMQRMAERPEVQDAL 195 Escherichia coli
YP_269461 164 CDYFLFMLAVWADE-FKKPPl-------gFSNLSRYLRKLAKRDAIINVC 205 Colwellia psychrerythraea 34H
YP_370800 167 LDPYALMLCRWTRG-FAEPAr-------qRPVLGGYLQRVLARPAIQRAL 208 Burkholderia sp. 383
NP_934649 172 CDYFLFMLAEWSLP-IEKSPl-------dFKHLAAYLKRLCLNPTIKAVC 213 Vibrio vulnificus YJ016
YP_369226 161 VDFLALMLMRWTRN-MPRPAt-------tWPNLVRYIQHLRGTPTFLELN 202 Burkholderia sp. 383
AAK22246  150 LDLYVAVVSRWGPRrVRFYEa--------APRMSEAVRRADADPRLAAFW 191 Caulobacter crescentus CB15
AAV94613  161 LSWYLACLMRWLAL-YPLDAdrswfaaadTPHLHRILAALETRPATRAAQ 209 Silicibacter pomeroyi DSS-3
YP_259416 162 LDIQAAVVSRWSGA-REHLRd-------sHPDFLALLQRIDREPRIAAVL 203 Pseudomonas fluorescens Pf-5
YP_349465 160 LDVLAAVVTRWAGA-REHLRq-------aRPGFHAWLQRIDRHPVLAPVF 201 Pseudomonas fluorescens PfO-1
AAY38095  162 VEILASVVTQWSGA-REHLRn-------tRADFHALLLKVDAEPLVNAVI 203 Pseudomonas syringae pv. syringae B728a

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