1BYE,1AXD,1BX9


Conserved Protein Domain Family
GST_C_Phi

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cd03187: GST_C_Phi 
Click on image for an interactive view with Cn3D
C-terminal, alpha helical domain of Class Phi Glutathione S-transferases
Glutathione S-transferase (GST) C-terminal domain family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.
Statistics
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PSSM-Id: 198296
Aligned: 31 rows
Threshold Bit Score: 151.226
Created: 23-Sep-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
dimer interfacesubstrateN-terminal
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Structure:1BYE; Zea mays class Phi GST-I dimer; contacts at 3.5A
  • Structure:1AXD; Zea mays class Phi GST-I dimer; contacts at 3.5A
  • Comment:Residues from both N-terminal TRX-fold and C-terminal alpha helical domains form the dimer interface.
  • Citation:PMID 9817846
  • Citation:PMID 9417926

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           ##  ##   #                                                                
1BYE_D     89 EEAAMVDVWIEVEANQYTAALNPILFQVLISPMlgg------------------------ttdQKVVDENLEKLKKVLEV 144 maize
CAA48376   95 KAYGLFEQAASVEYSSFDPPASSLAYERVFAGMrgl------------------------ktnEELAKKYVDTLNAKMDG 150 thale cress
AAG34814   90 EERGLVEQWLEVEAHNFHPQAYNLCLHGLFGSLfgv------------------------tpdPKVIEESEAKLVQVLNI 145 soybean
AAN15396   90 EERGQVEQWLDVEATSYHPPLLALTLNIVFAPLmgf------------------------padEKVIKESEEKLAEVLDV 145 thale cress
AAX81329   91 EEKAVVDQWLEVEAHNFNELVYTLVMQLVILPRmge------------------------rgdLALAHTCEQKLEKVFDV 146 wine grape
AAB01781   91 KALGLFEQGASIETSYFDPNVSGLAFELVFKGMfggg-----------------------apdEARVKLLTQKLTQALDV 147 Naegleria fowleri
AAG34820   94 LERASIEQWLQAEAQSFDAPSSELAFQLAFAPHlkdv-----------------------rpdEARVAENEKKLHSMLGV 150 maize
AAG34822   92 LERASIEQWLQTEAQSFDVPSADMVYSLAYLPPdmqldgrgvgglpaatgtmnpahrqkveemLQLFEKSRRQLGKLLDI 171 maize
AAG34824   96 LERASIEQWLHNEEHAFNPPSRALFFHLAFPLGeg---------------------------eDDDIDVHTRKLEEVLEV 148 maize
CAA68993   91 EEKALVDQWLEVESNNYNDLVYNMVLQLLVFPKmgq------------------------tsdLTLVTKCANKLENVFDI 146 garden petunia
Feature 1                                                                     
1BYE_D    145 YEARLTkCKYLAGDFLSLADLNHVSVTLCLFa--TPYASVLDAYPHVKAWWSGLMERPSVQKVA 206 maize
CAA48376  151 YERILSkQKYLAGNDFTLADLFHLPYGAMVA---QLEPTVLDSKPHVKAWWAASLRVIPGRLLR 211 thale cress
AAG34814  146 YEERLSkTKYLAGDFFSIADISHLPFLDYVVn-nMGKKYLLEERKHVGAWWDDISSRPSWNKVL 208 soybean
AAN15396  146 YEAQLSkNEYLAGDFVSLADLAHLPFTEYLVg-pIGKAHLIKDRKHVSAWWDKISSRAAWKEVS 208 thale cress
AAX81329  147 YEQRLSkSRYLAGDSFTLADLSHLPAIRYLVk-eAGMAHLVTERKSVSAWWEDISNRAAWKKVM 209 wine grape
AAB01781  148 YEKILAkQEYIGGNQFTLADLYHLPYGNYLFhekVNLGHLINERPHVKAWWEKITKRDSWIQAL 211 Naegleria fowleri
AAG34820  151 YDDILSkNEYLAGDDFTLADLSHLPNSHYIVnssDRGRKLFTARKHVARWYDKISTRDSWRQVM 214 maize
AAG34822  172 YEQRLGeEAFLAGGKFTLADLSHLPNADRLAg-dPRSARLMESRRNVSKWWDTVSRRDSWVRVK 234 maize
AAG34824  149 YEQRLSdSEFLVGNKFTLADLVHLPNSHYIKa-sNKFLYLYDSRKNVRRWWDAISDRSSWKKVL 211 maize
CAA68993  147 YEQRLSkSKYLAGEFFSLADLSHLPSLRFLMn-eGGFSHLVTKRKCLHEWYLDISSRDSWKKVL 209 garden petunia

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