Conserved Protein Domain Family
oculospanin_like_LEL

?
cd03167: oculospanin_like_LEL 
Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells.
Statistics
?
PSSM-Id: 239420
Aligned: 6 rows
Threshold Bit Score: 164.557
Created: 14-Nov-2005
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
dimer interface
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Comment:dimeric assembly observed in the CD81 crystal is predicted to resemble quaternary structure of intact CD81 at the cell surface

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1      #    #   # ##  #             #  ##  ##                                         
XP_540483 216 VALWGPLQDGLEYTLRAAVAHYQDDPDLHFLIDQVQRGLQCCGVSSYQDWtrnLHFNCSSPg-aQACSLPASCCIRpr-e 293 dog
AAG42857  172 VALWGPLQDSLEHTLRVAIAHYQDDPDLRFLLDQVQLGLRCCGAASYQDWqqnLYFNCSSPg-vQACSLPASCCIDpr-e 249 human
BAE28380  180 VTLWKPLQDSLKYTLHAAIIHYWDDPDLHFLLDQVQLGLQCCGAVSYQDWqqnLYFNCSSPg-vQACSLPASCCINpq-e 257 house mouse
XP_689220 168 FSMQAQMEDYLRLGMLTAIVRYQDDLDLRFITDEIQTSLQCCGADTYRDWeinVYYNCSAPg-vQACGVPPSCCIDpl-e 245 zebrafish
XP_415703 170 LVARQRLRDALQDALLLCLLRYQEEPDLRFLVDEVQRSLRCCGLSSYRDWesnPYFNCSAPg-vQACSVPASCCLDpw-q 247 chicken
XP_875180 115 VALWGQLQDGLEHVLRLAITHYQDDPDLCFLIDQVQLGLQCCGAASYQDWq-wNLFPCGSAgkeSACNPPVPCCCPppsn 193 cow
Feature 1                                               
XP_540483 294 dAAAVSDPCGLGALGLDeeaaqrVVHLQGCGPLLRGWLRRSL 335 dog
AAG42857  250 dGASVNDQCGFGVLRLDadaaqrVVYLEGCGPPLRRWLRANL 291 human
BAE28380  258 dGAVVNTQCGFGALGLDqnvagqVVFLQGCWPALQEWLRGNT 299 house mouse
XP_689220 246 nGTVWNSQCGVGAQQLDefsaqsVIFLGGCLGSVARWMEHNG 287 zebrafish
XP_415703 248 nGSITNDQCAFGVLHLGdvaaagVVHLGGCVVQLGAWLRGQA 289 chicken
XP_875180 194 aGLPPTVVCGVCLLAKKldaaqrVVHLEGCGPPLLQWLRSNI 235 cow

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap