1G8Q


Conserved Protein Domain Family
tetraspanin_LEL

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cd03127: tetraspanin_LEL 
Click on image for an interactive view with Cn3D
Tetraspanin, extracellular domain or large extracellular loop (LEL). Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integrins.
Links
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Statistics
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PSSM-Id: 239401
Aligned: 112 rows
Threshold Bit Score: 46.3435
Created: 4-Apr-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
dimer interface
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Comment:dimeric assembly observed in the crystal is predicted to resemble quaternary structure of intact CD81 at the cell surface
  • Structure:1G8Q: the extracellular domain of human CD81 forms a dimer

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      #    #   # ##  #                #  ##  ##                                      
1G8Q_A      1 FVNKDQIAKDVKQFYDQALQQAvvdddannAKAVVKTFHETLDCCGSSTLtalt-------------tsvlKNNLCPSGs 67  human
AAY66979  104 YVYRSKIESALRTAATNSVDKYfnd---teVEKLWDDIQSNLHCCGANSTddf---------------rgkIPSSCCENk 165 black-legged tick
AAF90148  108 YALRGQVTTMLDTNLRDTMPKYyrn---peVQDAFDFIQSRLNCCGVDSYldwsdvfpptgvngisvanisVPNSCCAEs 184 tobacco hornworm
EAA07447  104 YYKHEELSGILEKGFNKTLDSYatd---kgAQEAWNLVQSEMVCCGIKGPedwepi----------ykndtVPRACCHRm 170 Anopheles gambiae ...
XP_396149 108 YALQDGIKDLLAEKINITMHQYgkn---veATEAIDFLQSKLYCCGYNGYkdweei----------mkeqkFPSSCQSDi 174 honey bee
EAA10148  110 FVLRGQVSMMVRQKIFDSMGDYkqq---dgYRNPIDTLQNTLECCGVDGFsdwaqflp------sdgtvmeYPETCCAAp 180 Anopheles gambiae ...
AAN17276  105 IVEKPKVKKHITSALKKLVDKYrnd---ehVRKVFDEIQQKLHCCGADSPkdy---------------genPPTSCSKDg 166 Schistosoma mansoni
AAL75584  104 YAYRSKIEHAIRTEATKSIEQYhnd---tdVQHLWDDIQSSLHCCGANSTady---------------gdkLPQSCCPDk 165 Dermacentor variab...
NP_723426 110 FVMQSQVRGMLIRTMNQALAEYehd---pyVESGVDFMQSMLECCGVNEPedwkdylsanvnftlgvddvvVPNSCCGNq 186 fruit fly
AAW27119  105 IIEKPKVKRHVTTALKDLVGQYghd---rhLDKVLDEIQDKLQCCGAESPady---------------srgPPPSCKNYn 166 Schistosoma japonicum
Feature 1                                         
1G8Q_A     68 niis-------------nlfkeDCHQKIDDLFSGKH 90  human
AAY66979  166 pttcda----------ahaykiTCIDALINKFKEKI 191 black-legged tick
AAF90148  185 rfeivdntq---idecvklyanGCLPRVFYLVYQSA 217 tobacco hornworm
EAA07447  171 pvgvnkc-------treyasteGCFSKLSSYLGSKS 199 Anopheles gambiae str. PEST
XP_396149 175 psenntciygdkeilcsefyttGCIKNLSIIIHRSA 210 honey bee
EAA10148  181 pvnge-----------cmpreyGCYSRLSWLISQGS 205 Anopheles gambiae str. PEST
AAN17276  167 vq-----------------fteGCIKKVSDLSKAHL 185 Schistosoma mansoni
AAL75584  166 p--------------------eDCTATCQRHTKGTA 181 Dermacentor variabilis
NP_723426 187 ptslndstq----mtcmetydyGCFRKMNFIVSQSA 218 fruit fly
AAW27119  167 ---------------------eGCIGKVTDLTKKHL 181 Schistosoma japonicum

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