1RJ5


Conserved Protein Domain Family
alpha_CA_VI_IX_XII_XIV

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cd03123: alpha_CA_VI_IX_XII_XIV 
Click on image for an interactive view with Cn3D
Carbonic anhydrase alpha, isozymes VI, IX, XII and XIV. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Alpha CAs are mostly monomeric enzymes. The zinc ion is complexed by three histidine residues. This sub-family comprises the secreted CA VI, which is found in saliva, for example, and the membrane proteins CA IX, XII, and XIV.
Statistics
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PSSM-Id: 239397
Aligned: 14 rows
Threshold Bit Score: 407.078
Created: 1-Nov-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitezinc binding
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:zinc binding histidines and other residues found to be important for enzymatic activity

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #                       #
1RJ5_A        12 GQDHWPTSYPECGGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLgtepLDLHNNGHTVQLSLPPTLHLGGLPr-KYTAAQ 90  Mus musculus
XP_871549    133 GAPPWPQVSPACAGRFQSPVDIRPELTAFCPALRPLEFLGFELPpqpkLRLCNNGHTVQLSLPSGLKMALGPgqEYRALQ 212 cow
P18761        30 GESQWSEQYPSCGGERQSPIDVKTEEVMFNPSLKPLSLVNYEKEnl-eFTMTNNGHTVSIDLPPSMYLETSDgtEFISKA 108 house mouse
NP_001207    145 GDPPWPRVSPACAGRFQSPVDIRPQLAAFCPALRPLELLGFQLPplpeLRLRNNGHSVQLTLPPGLEMALGPgrEYRALQ 224 human
CAF93821      34 DQMHWPTKYPACGGKKQSPIDIQQRNVRFNPDMLQLELSGYDAQqg-tFLMTNNGHTVQIDLPPTMVITEGLpgKYTAVQ 112 Tetraodon nigro...
AAH72918      35 DEANWGKKYPTCAAKHQSPIDIQRKKVRHNPELTQLELIGYDGPltghFKVTNNGHSVQIDLPSTMTIKKGLnsLYTAVQ 114 African clawed ...
AAV38857      29 GQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPgtepLDLHNNGHTVQLSLPSTLYLGGLPr-KYVAAQ 107 human
XP_216584     30 EESRWPEKYPSCGGERQSPIDVKRREVHFSSSLLPLHMVNYEEEgl-eLSMTNNGHTVQITLPNTMSMRDSDgtVYRTKQ 108 Norway rat
NP_001016431  30 GEKSWPKNYEFCGGVYQSPIDIHQDILQYDSSLQPVKLNGYNVSpaesFTLSNNGHTVQMSLVPTMQIKIAPf-HYTASQ 108 western clawed ...
XP_694982     89 DQDAWLSAFEHCGGKSQSPINIDTHKVLHEPRLPPIQLDGYDLTgshsLTLLNNGHTLQLSLPSSMRIRRGFdqVYVAAQ 168 zebrafish
Feature 1         # #           #            #                                                   
1RJ5_A        91 LHLHWGQrgs-leGSEHHINSEATAAELHVVHYDSqSYSSLSEAAQKPQGLAVLGILIevg-eteNPAYDHILSRLHEI- 167 Mus musculus
XP_871549    213 LHLHWGAag--rpGSEHTVDGHRFPAEIHVVHLST-AFEEFDEALGRPGGLAVLAAFLqea-qkkNSAYEQLLSRLGEI- 287 cow
P18761       109 FHFHWGGrdwelsGSEHTIDGIRSIMEAHFVHFNK-EYGTYENAKDQKNGLAVLAVLFkideyaeNTYYSDIISALKDI- 186 house mouse
NP_001207    225 LHLHWGAag--rpGSEHTVEGHRFPAEIHVVHLST-AFARVDEALGRPGGLAVLAAFLeeg-peeNSAYEQLLSRLEEI- 299 human
CAF93821     113 MHLHWGGwdleasGAEHTIDGVRYMAELHVVHYNSdKYKSFIEARDKPDGLAVLAFFYddg-hfeNTYYSDFIANLGKI- 190 Tetraodon nigro...
AAH72918     115 MHLHWGGlesetsGSEHTIDGMRYLAELHIVHYNSgAYKSFDEAKDKPNGLAVLAFLYttg-nyeNTYYSDFISKLAKI- 192 African clawed ...
AAV38857     108 LHLHWGQkgs-pgGSEHQINSEATFAELHIVHYDSdSYDSLSEAAERPQGLAVLGILIevg-etkNIAYEHILSHLHEV- 184 human
XP_216584    109 MHFHWGGrdseisGSEHTIDGMRHAIEIHLVHFNE-KYETYEKAVDQPDGLAVMAVLVkvedyteNDYYSTFISELENVk 187 Norway rat
NP_001016431 109 LHLHWGQrgt-qkGSEHCIEGKRFAGEVHLVNYNSdKYSDITTAMKESDGLAVLGILLevg--pfNPTFEKIISQLHSI- 184 western clawed ...
XP_694982    169 LHFHWGTte--vpGSEHTIDNIHYPAEIHVVHYNS-KYANLTEAASKADGLAVLGGFIaig-lheNDNYEKILSALSDV- 243 zebrafish
Feature 1                                                                                        
1RJ5_A       168 -----------------------------------------------------------------------RYKDQKTSV 176 Mus musculus
XP_871549    288 -----------------------------------------------------------------------TEKDSETWV 296 cow
P18761       187 -----------------------------------------------------------------------EKPGETTTL 195 house mouse
NP_001207    300 -----------------------------------------------------------------------AEEGSETQV 308 human
CAF93821     191 -----------------------------------------------------------------------KYAGQSMYI 199 Tetraodon nigro...
AAH72918     193 -----------------------------------------------------------------------RYAGQETEM 201 African clawed ...
AAV38857     185 -----------------------------------------------------------------------RHKDQKTSV 193 human
XP_216584    188 ytgkecpqeegcsskpgdsflaigsfilwsnpgdrfsfilwlrsadlnipeaepelsllgrqssflrnslsFLSGQTTTL 267 Norway rat
NP_001016431 185 -----------------------------------------------------------------------GYKDQSVQI 193 western clawed ...
XP_694982    244 -----------------------------------------------------------------------STEESLTVI 252 zebrafish
Feature 1                               #                                                        
1RJ5_A       177 PPFSVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSsteedpsepLVQNYRVPQPLNQRT 256 Mus musculus
XP_871549    297 PGLDVSALLPSDLSRYFRYEGSLTTPPCAQGVIWTVFNQTVKLSAKQLHTLSDSLWgpd---dsrLQLNFRATQPLNGRI 373 cow
P18761       196 KDTTIRDLLPKDVHHYYTYPGSLTTPPCTENVQWFVLRDRVTLSKAQVVTIENSVMdhn---nntIQNGYRSTQPNNHRV 272 house mouse
NP_001207    309 PGLDISALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVMLSAKQLHTLSDTLWgpg---dsrLQLNFRATQPLNGRV 385 human
CAF93821     200 SSLDVRSMLPENLNHFFRYQGSLTTPPCYESILWTVFDTPITLSHNQIRKLESTLMdld---nktLWNDYRIAQPLNDRV 276 Tetraodon nigro...
AAH72918     202 HTLDVMAMLPENLVNFYRYDGSLTTPPCTENVLWTVFDSPVFLSKTQIDLLENTLLdwh---nktLRNDYRHAQPWHDRT 278 African clawed ...
AAV38857     194 PPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFsteeepsklLVQNYRALQPLNQRM 273 human
XP_216584    268 RNVNIRNMLPGDIRHYYTYQGSLTTPPCTENVKWFVFQDSATISKAQAERIENAVMdhh---nqtIRNGYRRTQPLHNRV 344 Norway rat
NP_001016431 194 AGFNVQELLPKRLDEYYRYEGSLTTPPCYPSVLWTVFRNPVTISEEQLITLETALYstdrnesvqMTNNYRQLQPHGDRL 273 western clawed ...
XP_694982    253 PGFNVRHLLPNSLERFYRYSGSLTTPPCLQTVSWTLFNDSIRVSRRQLAALEESLKteh---nklLSKNFRAPQLLHGRK 329 zebrafish
Feature 1             
1RJ5_A       257 IFASF 261 Mus musculus
XP_871549    374 IEASF 378 cow
P18761       273 VEANF 277 house mouse
NP_001207    386 IEASF 390 human
CAF93821     277 VESSF 281 Tetraodon nigroviridis
AAH72918     279 VEASF 283 African clawed frog
AAV38857     274 VFASF 278 human
XP_216584    345 VEANF 349 Norway rat
NP_001016431 274 VSVSF 278 western clawed frog
XP_694982    330 IQSSF 334 zebrafish

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