Conserved Protein Domain Family
TRX_Fd_NuoE_W_FDH_beta

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cd03082: TRX_Fd_NuoE_W_FDH_beta 
TRX-like [2Fe-2S] Ferredoxin (Fd) family, NADH:ubiquinone oxidoreductase (Nuo) subunit E family, Tungsten-containing formate dehydrogenase (W-FDH) beta subunit; composed of proteins similar to the W-FDH beta subunit of Methylobacterium extorquens. W-FDH is a heterodimeric NAD-dependent enzyme catalyzing the conversion of formate to carbon dioxide. The beta subunit is a fusion protein containing an N-terminal NuoE domain and a C-terminal NuoF domain. NuoE and NuoF are components of Nuo, a multisubunit complex catalyzing the electron transfer of NADH to quinone coupled with the transfer of protons across the membrane. Electrons are transferred from NADH to quinone through a chain of iron-sulfur clusters in Nuo, including the [2Fe-2S] cluster in NuoE and the [4Fe-4S] cluster in NuoF. In addition, NuoF is also the NADH- and FMN-binding subunit. Similarly, the beta subunit of W-FDH is most likely involved in the electron transport chain during the NAD-dependent oxidation of formate.
Statistics
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PSSM-Id: 239380
Aligned: 12 rows
Threshold Bit Score: 83.9922
Created: 4-Oct-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:[2Fe-2S] cluster binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #    #                            #   #                                   
AAN03798    107 RLTIRVCDSITCAMFGADELLETLQRELAsd-aVRVVRAPCVGLCDHAPAVEVG-----HNFLHRADL---ASVRAAVEA 177 Methylobacterium...
NP_768956   107 PLTIRVCDSLTCEMLGGGQLLQDLQRSAGp--gIRVVRAPCVGLCDAAPVAEVG-----HHFVHQATA---AEVLATAAR 176 Bradyrhizobium j...
AAU91334    101 PLTVRVCESLSCAMAGAHALMPALKDALGe--gVRIQPVPCVGRCQHAPVAVVG-----QNPVDRATP---AAVSAAVEQ 170 Methylococcus ca...
AAV94138    109 ALTIRVCDSLSCALAGAEQLRAALEEGLDpg-qVRVLRAPCMGRCDTAPVLELG-----HNHIDHATP---EKVRAAIAA 179 Silicibacter pom...
YP_158570   112 ALTVRVCESLGCAMAGGAELAASLASQLGa--eVRVQRVPCVGRCDSAPVAVVG-----QRPVLHADAdrvAAVVAGGER 184 Azoarcus sp. EbN1
ZP_00202580 108 ALTVRVCEGIACEMAGAQVLIDKLPAVLGt--dVRVVAAPCIGRCEKAPAVLAG-----QKPVDGATV---EAVASCVAA 177 Ralstonia eutrop...
EAN06683     95 ALTIRVCDSVSCMLAGAETLIAELQAGADpa-aIRIMRAPCMGRCAGAPAARVG-----DREVDGATAeglLGMAAAGET 168 Mesorhizobium sp...
ZP_00243732 111 PLTVRVCDGIACELTGARDLLTRLPALLGt--eVRVIAAPCIGRCEQAPAAVVH-----QCPVPNATP---EAVQAAVTA 180 Rubrivivax gelat...
ZP_00471829 126 EVTVRVCDSLSCRLAGAEALKAKLAAGVDpe-aVRVVRAPCMGRCDTAPVVEVG-----HHHVRFATH---EGVASVIDT 196 Chromohalobacter...
ZP_00691139 115 ALTVRVCDSLSCAMARSDDLLARLTGLLGa--sVRVMAAPCLGRCEQAPAVLVG-----QRAVPNATT---ASVLEAVQV 184 Rhodoferax ferri...
BAC69546    105 ATVLHVCTDLACASAGAAELCAGVEARLGpgsgVGVERGPCLGLCERAPAALAVr---aGDPVRTAVSa-pATVEAAVLA 180 Streptomyces ave...
CAA22364     88 ATVLHVCTDLACTAAGASRLCAAVESRLGpesgVKLERSPCLGLCERAPATLVIragesARPAQEDTParpAFEDEAVQA 167 Streptomyces coe...
Feature 1        
AAN03798    178 E 178 Methylobacterium extorquens
NP_768956   177 G 177 Bradyrhizobium japonicum USDA 110
AAU91334    171 G 171 Methylococcus capsulatus str. Bath
AAV94138    180 G 180 Silicibacter pomeroyi DSS-3
YP_158570   185 D 185 Azoarcus sp. EbN1
ZP_00202580 178 G 178 Ralstonia eutropha JMP134
EAN06683    169 G 169 Mesorhizobium sp. BNC1
ZP_00243732 181 G 181 Rubrivivax gelatinosus PM1
ZP_00471829 197 G 197 Chromohalobacter salexigens DSM 3043
ZP_00691139 185 A 185 Rhodoferax ferrireducens DSM 15236
BAC69546    181 A 181 Streptomyces avermitilis MA-4680
CAA22364    168 E 168 Streptomyces coelicolor A3(2)

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