Conserved Protein Domain Family
TRX_Fd_NuoE_FDH_gamma

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cd03081: TRX_Fd_NuoE_FDH_gamma 
TRX-like [2Fe-2S] Ferredoxin (Fd) family, NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily, NAD-dependent formate dehydrogenase (FDH) gamma subunit; composed of proteins similar to the gamma subunit of NAD-linked FDH of Ralstonia eutropha, a soluble enzyme that catalyzes the irreversible oxidation of formate to carbon dioxide accompanied by the reduction of NAD+ to NADH. FDH is a heteromeric enzyme composed of four nonidentical subunits (alpha, beta, gamma and delta). The FDH gamma subunit is closely related to NuoE, which is part of a multisubunit complex (Nuo) catalyzing the electron transfer of NADH to quinone coupled with the transfer of protons across the membrane. Electrons are transferred from NADH to quinone through a chain of iron-sulfur clusters in Nuo, including the [2Fe-2S] cluster present in NuoE. Similarly, the FDH gamma subunit is hypothesized to be involved in an electron transport chain involving other FDH subunits, upon the oxidation of formate.
Statistics
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PSSM-Id: 239379
Aligned: 15 rows
Threshold Bit Score: 96.2976
Created: 4-Oct-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:[2Fe-2S] cluster binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #    #                                          #   #                     
CAA11233     81 RHVVQVCRAEACQSVGAEALAEHAQRALGcgfhet-------tadgqVTLEPVYCLGQCACGPAVMVGEQLHGYVDA-RR 152 Cupriavidus necator
ZP_00243289  72 RHVIQVCRAEACQALGAEALLTHAERRLVcrshas-------ssdgrYTLEPVFCLGLCASSPAIVIDERLHARISP-AA 143 Rubrivivax gelat...
CAE31821    101 RHVLEICRAESCQAMGGDALAAHARQRLGcefhat-------aadgsCTLEPVYCLGLCAQSPAVMIDGQPHARVTP-AK 172 Bordetella bronc...
AAU92351     75 KHTIHLCRAESCQAMNSESLETHVKARLGidyhet-------tadgaFSLEPVYCLGNCACSPSMMIDHEVYGHVSP-QS 146 Methylococcus ca...
ZP_00564967  72 RHVLQVCRAESCQAMGCGALESHVKSSLGidyhet-------tsdgsITLEPVYCLGNCACSPAIMLDDEIYGRVSP-QQ 143 Methylobacillus ...
ZP_00631273  78 RHVLRLCRAEACQSMGAEALADEVRAALGidwhet-------tpdgrLTLEPVFCLGLCACAPSAQMGERLIGRASL-AK 149 Paracoccus denit...
ZP_00556691  81 KRVLKICRAEACQAMGANAMSDAVLAQLGlgwget-------aadggLTVEPIYCLGLCACGPAAMIDGKLKGRVTAdSL 153 Jannaschia sp. CCS1
ZP_00424725  72 RVTIQMCRAEACRSMGCEALAEHAQARTGcrfdaahgdaadphappdVALESVYCLGLCAQSPSMTINGVLHAKVTP-EK 150 Burkholderia vie...
YP_270680    76 AHVIEICRGESCQAMGSRALEENIKQNLSidyhqt-------skdrqYTLEPVYCLGNCACSPAMRIGDDIHGELDL-QK 147 Colwellia psychr...
YP_268784    78 RHIIEICRGEACQAMGSKALEKAIKSQLAvdfgqt-------tvdknFTLEPVYCLGNCACSPSIKVADNVYGRMNS-EK 149 Colwellia psychr...
Feature 1               
CAA11233    153 FDALVRSL 160 Cupriavidus necator
ZP_00243289 144 FDRLIGAL 151 Rubrivivax gelatinosus PM1
CAE31821    173 LDRLLARA 180 Bordetella bronchiseptica RB50
AAU92351    147 FDAIIDEL 154 Methylococcus capsulatus str. Bath
ZP_00564967 144 VESLLASA 151 Methylobacillus flagellatus KT
ZP_00631273 150 VQKLVAEA 157 Paracoccus denitrificans PD1222
ZP_00556691 154 IAEVSPQQ 161 Jannaschia sp. CCS1
ZP_00424725 151 FDALLAQA 158 Burkholderia vietnamiensis G4
YP_270680   148 FEQIIASL 155 Colwellia psychrerythraea 34H
YP_268784   150 FAKLSEQL 157 Colwellia psychrerythraea 34H

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