1A8Y,1SJI


Conserved Protein Domain Family
PDI_b'_Calsequestrin_C

?
cd03074: PDI_b'_Calsequestrin_C 
Click on image for an interactive view with Cn3D
Protein Disulfide Isomerase (PDIb') family, Calsequestrin subfamily, C-terminal TRX-fold domain; Calsequestrin is the major calcium storage protein in the sarcoplasmic reticulum (SR) of skeletal and cardiac muscle. It stores calcium ions in sufficient quantities (up to 20 mM) to allow repetitive contractions and is essential to maintain movement, respiration and heart beat. A missense mutation in human cardiac calsequestrin is associated with catecholamine-induced polymorphic ventricular tachycardia (CPVT), a rare disease characterized by seizures or sudden death in response to physiologic or emotional stress. Calsequestrin is a highly acidic protein with up to 50 calcium binding sites formed simply by the clustering of two or more acidic residues. The monomer contains three redox inactive TRX-fold domains. Calsequestrin is condensed as a linear polymer in the SR lumen and is membrane-anchored through binding with intra-membrane proteins triadin, junctin and ryanodine receptor (RyR) Ca2+ release channel. In addition to its role as a calcium ion buffer, calsequestrin also regulates the activity of the RyR channel, coordinating the release of calcium ions from the SR with the loading of the calcium store. The C-terminal TRX-fold domain (or domain III) mediates back-to-back dimer interaction and also contriubutes to the front-to-front dimer interface, both of which are important features in the formation of calsequestrin polymers.
Statistics
?
PSSM-Id: 239372
Aligned: 11 rows
Threshold Bit Score: 163.039
Created: 19-Apr-2005
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
front-to-front
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:front-to-front dimer interface [polypeptide binding site]
Evidence:
  • Structure:1SJI; Canis familiaris cardiac calsequestrin dimer; contacts at 3.5A
  • Comment:The front-to-front dimer interface of calsequestrin is formed primarily by residues from the N-terminal TRX-fold domain (or domain I), with minor contributions from the C-terminal domain. Polymerization occurs by the formation of additional back-to-back interactions between calsequestrin monomers through residues in the C-terminal TRX-fold domain (or domain III).

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                  ##                   #                                        #       
1A8Y         228 STLRKLKPESMYETWEDDMD-GIHIVAFAEEADPDGYEFLEILKSVAQDNT-DNPDLSIIWIDPDDFPLLVPYWEKTFDI 305 Oryctolagus cun...
1SJI_B       226 PTLRRLRPEDMFETWEDDLN-GIHIVAFAERSDPDGYEFLEILKQVARDNT-DNPDLSIVWIDPDDFPLLVAYWEKTFKI 303 dog
AAA48674     228 ATLRKLRPEDMFETWEDDME-GIHIVAFAEEDDPDGFEFLEILKQVARDNT-DNPDLSIVWIDPDDFPLLITYWEKTFKI 305 chicken
CAA93667     256 PVMQKLTLDNYFNLWRDPEEeERMILAFVDEETREGRAMKRLLDKIADENSeHAGTLEIILVDPDEFPLMVDVWEDMFGI 335 Caenorhabditis ...
NP_001223    247 PTLRRLRPEEMFETWEDDLN-GIHIVAFAEKSDPDGYEFLEILKQVARDNT-DNPDLSILWIDPDDFPLLVAYWEKTFKI 324 human
AAH41283     269 ATLRKLRPEDMFETWEDDLD-GIHIVAFAEEEDPDGYEFLQILKEVARENT-ENPELSIIWIDPDNFPLLVSYWEKTFHI 346 African clawed ...
AAH46947     250 PTLRKLKPDSMYETWEDDLD-GIHIVAFAEEDDPDGYEFLEIIKEVAEDNT-DNPDLSIIWIDPEEFPLLIPYWEETFNI 327 African clawed ...
CAE17619     251 PTLRKMQPHNMYEIWEDALD-GEHIIAFAEEGDPDGFEFLEIVKEVAEDNT-ENPDLSIIWIDPDDFPLLVHYWEKTFDI 328 zebrafish
NP_001002682 248 PTLRKLKAEDMFETWEDDLN-GIHIVAFAEEEDPDGFEFLEILKEVARDNT-HNPDLSIVWIDPDNFPLLIPYWEMTFKV 325 zebrafish
CAI15276     262 STLRKLKPESMYETWEDDMD-GIHIVAFAEEADPDGFEFLETLKAVAQDNT-ENPDLSIIWIDPDDFPLLVPYWEKTFDI 339 human
BAC86117     251 PTLRKLEPHSMYETWEDDID-GEHIVAFAEEDDPDGYEFLEILKEVARENT-DNADLSIIWIDPDDFPLLVPYWEKTFGI 328 human
Feature 1                                                          
1A8Y         306 DLS-APQIGVVNVTDADSVWMEMdde-------edlPSAEELEDWLEDVL 347 Oryctolagus cuniculus
1SJI_B       304 DLF-KPQIGVVNVTDADSVWMEIpdd-------ddlPTAEELEDWIEDVL 345 dog
AAA48674     306 DLF-RPQIGIVNVTDADSVWMEIrdd-------ddlPTAEELEDWIEDVL 347 chicken
CAA93667     336 DIEeGPQIGLIDISEKEGIWFDMsqvnlddpkkhsdSNFEALQSWIDQIL 385 Caenorhabditis elegans
NP_001223    325 DLF-RPQIGVVNVTDADSVWMEIpdd-------ddlPTAEELEDWIEDVL 366 human
AAH41283     347 DLF-RPQIGVVNVTDADSVWMEMkda-------edlPSPDELEQWIEDVL 388 African clawed frog
AAH46947     328 DLS-RPHIGIVNVTDADSIWMDMdde-------edlPTVDELEDWLEDVL 369 African clawed frog
CAE17619     329 DLS-SPQIGVVEVDDAESIWFDMddd--------dmPTVDELEDWLEDVL 369 zebrafish
NP_001002682 326 DLF-RPQIGVVNVTDADSVWLEIpnd-------delPSAEELENWIEDVL 367 zebrafish
CAI15276     340 DLS-APQIGVVNVTDADSVWMEMdde-------edlPSAEELEDWLEDVL 381 human
BAC86117     329 DLG-SPQIGVVDVEDADSVWMEMddd-------edmPTADELEDWIEDVL 370 human

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap