Conserved Protein Domain Family
TRX_Fd_NuoE

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cd03064: TRX_Fd_NuoE 
TRX-like [2Fe-2S] Ferredoxin (Fd) family, NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily; Nuo, also called respiratory chain Complex 1, is the entry point for electrons into the respiratory chains of bacteria and the mitochondria of eukaryotes. It is a multisubunit complex with at least 14 core subunits. It catalyzes the electron transfer of NADH to quinone coupled with the transfer of protons across the membrane, providing the proton motive force required for energy-consuming processes. Electrons are transferred from NADH to quinone through a chain of iron-sulfur clusters in Nuo, including the [2Fe-2S] cluster present in NuoE core subunit, also called the 24 kD subunit of Complex 1. This subfamily also include formate dehydrogenases, NiFe hydrogenases and NAD-reducing hydrogenases, that contain a NuoE domain. A subset of these proteins contain both NuoE and NuoF in a single chain. NuoF, also called the 51 kD subunit of Complex 1, contains one [4Fe-4S] cluster and also binds the NADH substrate and FMN.
Statistics
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PSSM-Id: 239362
Aligned: 140 rows
Threshold Bit Score: 54.832
Created: 28-Apr-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:[2Fe-2S] cluster binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #    #                                   #   #                            
P19404      129 KYHIQVCTTTPCMLRNsDSILEAIQKKLGikvgettpdklFTLIEVECLGACVNAPMVQIN-DNYYEDLTAKDIEEIIDE 207 human
P22317       69 KYRIYLCNSVIAKINGyQAVREALERETGirfgetdpngmFGLFDTPCIGLSDQEPAMLID-KVVFTRLRPGKITDIIAQ 147 Cupriavidus necator
YP_180895    73 KYVIRLCNSLPCYLNGtENILDTLVDNLGiepgqttldqrFTLELVPCLGLCDQSPAMVIN-GVVYGKLTAQLVTEVLDE 151 Dehalococcoides ...
ZP_00667649  74 RYVIHVCDSAVCWMEGyQRIIDYLCQRLKltvggtspdglFTLLPVCCIGYCDRAPAMMIN-RNVYGRLTREKIDRILDR 152 Syntrophobacter ...
CAB11191     82 KPRVRICNSWMCQQAAeEQGNSNWDSQCRsvat----kygFDVENTGCLGNCFQGPAMWIN-DKIYGVNTKEKLVDIMEA 156 fission yeast
ZP_00054592  79 SYRVLWSDNITDRMAGnADLMARMCKKLWlkpgkvsedglVSVDTTSCTGLCDQGPALLVN-YRPVTRMTAERVDQIVDL 157 Magnetospirillum...
ZP_00348631  74 KYRVLFSDNITDRMLGsKAMMDRLCNSLWvergkvsedglVSVAQTACTGMCDQGPALLIN-NYAIAGLTAERIDEIAEL 152 Dechloromonas ar...
AAB57889     69 KYRIYLSDTVIAKMNGyQAVHDSLERETGarfggtdktgmFGLFETPCIGLSDQEPAMLID-NVVFTRLRPGTIVDIITQ 147 Rhodococcus opacus
AAU91202     75 KFDIRISDSITDHMLGsREVAAGLCRKLGiqpgeprqdgrVGLSFTSCTGLCDQGPAGLIN-GYAIPRLTEDRTDQIARL 153 Methylococcus ca...
ZP_00278455  60 EYRVLFSDNITDRMQGnAALLDDLCRRLGvqrgqmredgrVSVDFCSCTGLCDQGPSLLINhHQVVTRLDAGRVAQLAEF 139 Burkholderia fun...
Feature 1        
P19404      208 L 208 human
P22317      148 L 148 Cupriavidus necator
YP_180895   152 L 152 Dehalococcoides ethenogenes 195
ZP_00667649 153 L 153 Syntrophobacter fumaroxidans MPOB
CAB11191    157 L 157 fission yeast
ZP_00054592 158 I 158 Magnetospirillum magnetotacticum MS-1
ZP_00348631 153 I 153 Dechloromonas aromatica RCB
AAB57889    148 L 148 Rhodococcus opacus
AAU91202    154 I 154 Methylococcus capsulatus str. Bath
ZP_00278455 140 I 140 Burkholderia fungorum LB400

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