Conserved Protein Domain Family
TRX_Fd_Sucrase

?
cd03062: TRX_Fd_Sucrase 
TRX-like [2Fe-2S] Ferredoxin (Fd) family, Sucrase subfamily; composed of proteins with similarity to a novel plant enzyme, isolated from potato, which contains a Fd-like domain and exhibits sucrolytic activity. The putative active site of the Fd-like domain of the enzyme contains two cysteines and two histidines for possible binding to iron-sulfur clusters, compared to four cysteines present in the active site of Fd.
Statistics
?
PSSM-Id: 239360
Aligned: 39 rows
Threshold Bit Score: 86.9154
Created: 19-Apr-2005
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Feature 1:putative [2Fe-2S] cluster binding site [ion binding site]
Evidence:
  • Comment:Based on similarity with other family members.
  • Comment:This subfamily contains two cysteines and two histidines in the metal binding site, instead of four cysteines typical of TRX-like [2Fe-2S] ferredoxins. This is similar to the binding site of Rieske-type iron-sulfur proteins.
  • Citation:PMID 8736555

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1             #        #                              #   #                             
AAB33256    117 GSYVFVCAHNLRDRRCGVCGPILIEEFSKLIeskglkdkVRVAACSHIGGHKYAGNVIIFSsgkdgdiVGHWYGYVTPSD 196 potato
ZP_00660363 173 SALFCVCTNGRHDACCAERGRPIARALDRAHp-------EETWEVSHIGGDRFAGNLVVLP-------QGLYYGRLDPAA 238 Nocardioides sp....
ZP_00397503 133 GPDLHVCTHGTVDAACGRYGFPVYRALHEAG--------LRAWRTGHFGGHRFAATAVEFP-------SGLLWAHLTPDL 197 Deinococcus geot...
BAB73886    142 IREIMVCTHGNVDVACSRFGYPIYQNLRQNYaaks-agqLRVWRCSHIGGHQFAPTLFDLP-------TGQFWGHIEPEI 213 Nostoc sp. PCC 7120
AAS92529     54 QKEILVCTHGSRDCRCSDRGVPLVSALRKEVnrrglesqIRIGQVAHVGGHKYAANAILLP-------TMDMLSNLSTEH 126 Cryptococcus gattii
BAB74359    143 IREIIICTHANYDRACGRFGYPLYQHLRKQYat----enLRVWQTNHFGGHQFAPTLIDFP-------HGQVWGHLEVDI 211 Nostoc sp. PCC 7120
BAB74281    130 TRDFLVCTHGSHDKCCAKYGNPFYHQALAKVedls-lshVRVWQSSHFGGHRFAPTMIELP-------EGRYYARLDQKS 201 Nostoc sp. PCC 7120
ZP_00675555 131 IRDLLVCTHGSHDKCCAKYGNPFYAEAKKTIselg-lknTRIWKTSHFGGHRFAPTMISFP-------DGRYYGLLNRES 202 Trichodesmium er...
ZP_00569248 151 PAEVLLCGHGARDRCCARLGTRLALDVAAAWp------gVRVRRCSHTGGHRFAPTGFTLP-------DGRAWGFLDVES 217 Frankia sp. EAN1pec
ZP_00471785 119 RDLLLCCTHGKKDKCCARYGYRTYKELARTVaah--elpFDVWESSHLGGCRFAASLVLLS-------PVRKYGRITPQQ 189 Chromohalobacter...
Feature 1                                                         
AAB33256    197 VPALLDEHIGe---------------------------gKVIERLWRGQM 219 potato
ZP_00660363 239 ALAVAGAHLAg---------------------------eLDLDHLRGRSS 261 Nocardioides sp. JS614
ZP_00397503 198 ALRVARRDLHp---------------------------aEVKPHLRGFAG 220 Deinococcus geothermalis DSM 11300
BAB73886    214 LDVLVWRNSPv---------------------------kQLRQFYRGWSG 236 Nostoc sp. PCC 7120
AAS92529    127 APCIIDHLFAlapsipsasvipiaergtkidkstyvkgeGMWKHWRGRYG 176 Cryptococcus gattii
BAB74359    212 LDCLIHRRGDv---------------------------sQLRPFYRGWTG 234 Nostoc sp. PCC 7120
BAB74281    202 FTSILTRTGDi---------------------------qCLKKVYRGWGI 224 Nostoc sp. PCC 7120
ZP_00675555 203 FQTILLQAGNi---------------------------kLLSQVYRGWSI 225 Trichodesmium erythraeum IMS101
ZP_00569248 218 LEVIMRRSGPp----------------------------PLRGHYRGNTA 239 Frankia sp. EAN1pec
ZP_00471785 190 ALPFLQAEARd---------------------------rRFLPGYRGDSR 212 Chromohalobacter salexigens DSM 3043

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap