1YY7


Conserved Protein Domain Family
GST_N_SspA

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cd03059: GST_N_SspA 
Click on image for an interactive view with Cn3D
GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Statistics
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PSSM-Id: 239357
Aligned: 13 rows
Threshold Bit Score: 124.748
Created: 17-Aug-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:putative GSH binding site (G-site) [chemical binding site]
Evidence:
  • Comment:The GST active site is composed of a GSH binding site (G-site), common to all GSTs, and a xenobiotic binding site (H-site), which varies between different classes and isotypes. Residues from the N-terminal TRX-fold domain form the G-site while the H-site is comprised mainly of residues from the C-terminal alpha helical domain.
  • Comment:Based on similarity with other GST family members.
  • Citation:PMID 9655824

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #                                    ###          ##           
1YY7_A       11 MTLFSGPTDIFSHQVRIVLAEKGVSVEIEQVEadNLPQDLIDLNPYRTVPTLVDRELTLYESRIIMEYLDERF 83  Yersinia pestis
YP_047541    11 ITLYSHADDFRSHWIRFLLAEKQIKYQLILVD--HEDEDLASLNPYNQLPMLIENNLKLFSTSIISEYIDDRY 81  Acinetobacter sp. ADP1
NP_298201    11 LTLFSSTNDVLCHRVRLVLAAKGVNYEMVSVDpqNPPEDLIDLNPYHSVPTLVERELVLYAASVVTEYVDERY 83  Xylella fastidiosa 9a5c
AAN66944      7 LACYSDPADHYSHRVRLVLAEKGVSVQLIDVDpaHLPRKLAEVNPYGSVPTLVDRDLALYESTVVMEYLEERY 79  Pseudomonas putida KT2440
AAO91241      7 MTLYSGPLDIYSHQVRIVLAEKGVTVDIHNVDanHPSEDLIELNPYATLPTLVDRDLVLFESRVIMEYLDERF 79  Coxiella burnetii RSA 493
YP_096707    10 MSLFSDVDDVYSHQVRIVLAEKGVNVEILAVKqdEPGADLLSINPYGTVPTLIDRELVLYEARIIMEYLDERF 82  Legionella pneumophila ...
YP_114392    11 MTLFCSPTCVYSHRTRIVLHEKGISADVEYVDmgDPPEDLVELNPYGTMPTLVDRDLVLYDSRIIMEYLDERF 83  Methylococcus capsulatu...
ZP_00417787   5 LTCYSDPADHYSHRVRMVLAEKGIVVQILDIDpgQDSDKLAELNPYGALPTLMDRDLLLYEPGVIMEYLEERY 77  Azotobacter vinelandii ...
ZP_00473771  10 MTFYSGSDDHYSHRVRIVLAEKGVAVDVIEINddNHPDELADLNPYNSTPTLLDRDLVLYESKVMMEYLDERF 82  Chromohalobacter salexi...
P45207       11 MTLFSNKDDIYCHQVKIVLAEKGVLYENAEVDlqALPEDLMELNPYGTVPTLVDRDLVLFNSRIIMEYLDERF 83  Haemophilus influenzae
CAA68006      2 MTLYSGITCPFSHRCRFVLYEKGMDFEIKDIDiyNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYIDERF 74  Neisseria gonorrhoeae
NP_521047     2 MVLYSGTTCPFSQRCRLVLFEKGMDFEIRDVDlfNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERF 74  Ralstonia solanacearum ...
AAZ24130     11 MTLFSHADDMYSHQTRIVLAEKGVGVDINLVDlaNLPEDLLDLNPYGTVPTLIDRELALYEAKIIVEYLDERF 83  Colwellia psychrerythra...

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