1EEM


Conserved Protein Domain Family
GST_N_Omega

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cd03055: GST_N_Omega 
Click on image for an interactive view with Cn3D
GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega GST genes may be associated with the development of some types of cancer and the age-at-onset of both Alzheimer's and Parkinson's diseases.
Statistics
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PSSM-Id: 239353
Aligned: 11 rows
Threshold Bit Score: 152.122
Created: 30-Mar-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:GSH binding site (G-site) [chemical binding site]
Evidence:
  • Structure:1EEM; Human class Omega GST with bound GSH; contacts at 3.5A
  • Comment:The GST active site is composed of a GSH binding site (G-site), common to all GSTs, and a xenobiotic binding site (H-site), which varies between different classes and isotypes. Residues from the N-terminal TRX-fold domain form the G-site while the H-site is comprised mainly of residues from the C-terminal alpha helical domain.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                 # #                        #           ###          
1EEM_A      5 SARSLGK-GSAPPGPVPegSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSq---G 80  human
P34345      7 TSKAIRK-GDAEPPLSKg-SFRVYNMRFCPWAERAMLYVAAKGIEAEVVNLNVTDKLEWYWTKHYQGKAPAVEHN----G 80  nematode
NP_648235   3 NGRHLAK-GSPMPDVPEdgILRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEKNPQGKVPALEIVrepgP 81  fruit fly
NP_741069  81 NSPTLHP-GSIEPPLTPg-NYRLYSMRFCPYAQRVLIYLAKKNIPVEVVNVNPDRSPNWYLPKSPIGRVPALEIN----G 154 nematode
CAD89618    3 TQQSFAT-GSACPELEAg-TLRVYSMRFCPYAQRALLVLTYKNIPHEVVNINLKNKPEWFLQKNPLGRVPTLEKD----D 76  Pacific oyster
AAH70673    4 SEKCLAK-GCPAPGPVPegTIRVYSMRFCPYAQRARLVLAAKGIKHEVININLKNKPDWFFEKSPFGLVPSLETSn---G 79  African clawed frog
XP_421747   5 HSRSLGK-GSAAPGPVPegVIRLYSMRFCPFAQRTRLVLRAKGIRHEVVNINLKNKPDWIFEKNPDGLVPVLETSk---G 80  chicken
AAH85467    4 SPKCLGK-ECSAPGPVPngQIRLYSMRFCPFAQRTRLVLTAKGVKHDIININLVSKPDWFLKKNPFGTVPVLETSs---G 79  zebrafish
BAD77935    4 SPPHHMKsGEAFPPKTPg-KLRIYSMQYCPYAQRTRLMLALKNVDHEVINIDLKDKPAWFLEKYQAGTVPVLEID----D 78  Halocynthia roretzi
XP_624501   2 SSKHLTI-GSVAPPIVPg-KIRLYSMRFCPYAQRIHLVLDAKHIPHDVVYVNLTHKPDWLLEKSPLGKVPCIELEg---G 76  honey bee
CAE71235    8 NSKVLKN-GDSEPSPPPagIYRIYNMRFCPWAQRALIYASVKNVPSEVINIHLKEKPDWYFSKHYKGQVPALELDe--gK 84  Caenorhabditis bri...
Feature 1         ##        
1EEM_A     81 QLIYESAITCEYLD 94  human
P34345     81 KVVIESGFIPEYLD 94  nematode
NP_648235  82 PVLTESLLICEYLD 95  fruit fly
NP_741069 155 KVVWESNVIVEYLD 168 nematode
CAD89618   77 RIVYESAICCDYLD 90  Pacific oyster
AAH70673   80 QVIYESPIVCDYLD 93  African clawed frog
XP_421747  81 QLIYESPITCEYLD 94  chicken
AAH85467   80 QVIYESPITCEYLD 93  zebrafish
BAD77935   79 KVIGESLITAEYID 92  Halocynthia roretzi
XP_624501  77 EILYESLVIAEYLD 90  honey bee
CAE71235   85 KHVIESAHIPEYLD 98  Caenorhabditis briggsae

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