1BYE,1AW9,1AXD,1BX9,1GNW


Conserved Protein Domain Family
GST_N_Phi

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cd03053: GST_N_Phi 
Click on image for an interactive view with Cn3D
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.
Statistics
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PSSM-Id: 239351
Aligned: 21 rows
Threshold Bit Score: 111.974
Created: 17-Mar-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:GSH binding site (G-site) [chemical binding site]
Evidence:
  • Structure:1BYE; Zea mays GST-I with bound Atrazine-GSH conjugate; contacts at 3.5A to the GSH moiety
  • Structure:1GNW; Arabidopsis thaliana GST with bound hexyl-GSH; contacts at 3.5A to the GSH moiety
  • Comment:The GST active site is composed of a GSH binding site (G-site), common to all GSTs, and a xenobiotic binding site (H-site), which varies between different classes and isotypes. Residues from the N-terminal TRX-fold domain form the G-site while the H-site is comprised mainly of residues from the C-terminal alpha helical domain.
  • Citation:PMID 9817846
  • Citation:PMID 8551521

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                #                                        ###          ##          
1BYE_D      2 PMKLYGAVmSWNLTRCATALEEAGSDYEIVPINfatae-hkspEHLVRNPFGQVPALQDGDLYLFESRAICKYAARK 77  maize
1AXD_B      2 PMKLYGAVmSWNLTRCATALEEAGSDYEIVPINfatae-hkspEHLVRNPFGQVPALQDGDLYLFESRAICKYAARK 77  maize
1BX9_A      2 GIKVFGHPaSIATRRVLIALHEKNLDFELVHVElkdge-hkkePFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHR 77  thale cress
1GNW_A      2 GIKVFGHPaSIATRRVLIALHEKNLDFELVHVElkdge-hkkePFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHR 77  thale cress
CAB83126    2 AMKLYGDEmSACVARVLLCLHEKNTEFELVPVNlfach-hklpSFLSMNPFGKVPALQDDDLTLFESRAITAYIAEK 77  thale cress
AAG34816    4 PMKVYGWAvSPWMARALVCLEEAGADYEIVPMSrcggd-hrrpEHLAKNPFGEIPVLEDGDLTLYQSRAIARYVLRK 79  maize
AAG34818    4 PVTVYGPMlSPAVARVAACLLEKDVPFQIEPVDmskge-hkspSFLKLQPFGQVPAFKDHLTTVFESRAICRYICDQ 79  maize
Q96324      2 VVKVYGQIkAANPQRVLLCFLEKDIEFEVIHVDldkle-qkkpQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATK 77  thale cress
AAM34480    2 VLKVYGPT-CASTKRVLVCLLEKEVEFEVIPVDltkge-hkdpEFLKLQPFGVVPVIQDGDYTLYESRAIMRFYADK 76  tepary bean
AAQ62409    5 KMKLHCGF-IWGNSAALFCINEKGLDFELVFVDwlageaktktFLSTLNPFGEVPVLEDGDLKLFEPKAITRYLAEQ 80  thale cress

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