1IYI,1GSE,1M0U,1OE8,1Q4J,1TW9,1XW5,1YQ1,2GSQ,3PGT,1XWK,1B4P,1FHE,1GSU,1UA5,2FHE,3GTU,5GSS,2GSR,1GSY,1TU8,3GSS,1B48,1F3A,1K3Y,1TDI,1ML6


Conserved Protein Domain Family
GST_N_Sigma_like

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cd03039: GST_N_Sigma_like 
Click on image for an interactive view with Cn3D
GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma members include the class II insect GSTs, S-crystallins from cephalopods and 28-kDa GSTs from parasitic flatworms. Drosophila GST2 is associated with indirect flight muscle and exhibits preference for catalyzing GSH conjugation to lipid peroxidation products, indicating an anti-oxidant role. S-crystallin constitutes the major lens protein in cephalopod eyes and is responsible for lens transparency and proper refractive index. The 28-kDa GST from Schistosoma is a multifunctional enzyme, exhibiting GSH transferase, GSH peroxidase and PGD2 synthase activities, and may play an important role in host-parasite interactions. Also members are novel GSTs from the fungus Cunninghamella elegans, designated as class Gamma, and from the protozoan Blepharisma japonicum, described as a light-inducible GST.
Statistics
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PSSM-Id: 239337
Aligned: 91 rows
Threshold Bit Score: 62.5664
Created: 22-Feb-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:GSH binding site (G-site) [chemical binding site]
Evidence:
  • Structure:1IYI; Human Class Sigma GST with bound GSH; contacts at 3.5A
  • Structure:1OE8; Schistosoma haematobium 28KDa GST with bound GSH; contacts at 3.5A
  • Structure:1XW5; Human GSTM2-2 with bound GSH; contacts at 3.5A
  • Comment:The GST active site is composed of a GSH binding site (G-site), common to all GSTs, and a xenobiotic binding site (H-site), which varies between different classes and isotypes. Residues from the N-terminal TRX-fold domain form the G-site while the H-site is comprised mainly of residues from the C-terminal alpha helical domain.
  • Comment:The N-terminal tyrosine is essential for activating the thiol group of GSH by stabilizing the thiolate anion form.
  • Citation:PMID 8182750

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #     #                                                  ###           ##   
1IYI_D      3 YKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEqadwpei---------------kstlpfGKIPILEVD-GLTLHQSLAI 66  human
BAA36351    5 YKLKSYDYVGVAESIRYLFAYGGIQYENIVLKkditite--------------vqktipfGKLPVLAVN-DTILFHPVPM 69  Japanese oak silkmoth
AAO51029   10 PQLTSLRYRGYVQFAQVLMAFHGVDYDMCYVDkiddql----------------rkelkfDQLPLFRETdGFKLNQSLAI 73  Dictyostelium disc...
AAO51292    7 PSLTYFQGRGLGQFSRVLLSYLGIPYENITVTeisdal----------------ratlpyGQLPIYRDG-DFVLTQSSTI 69  Dictyostelium disc...
1UA5_A      3 PILGYWKIKGLVQPTRLLLEYLEEKYEEHLYErdegdkwrn----------kkfelglefPNLPYYIDG-DVKLTQSMAI 71  Schistosoma japonicum
AAB21173    3 PKLGYWKIKGLVQPTRLLLEYLGERYEERLYDrndgdvwrn----------ekfklgldfPNLPYYIDG-DVKLTQSMAI 71  Schistosoma mansoni
AAM64045    3 PTLAYWDIRGLAEQSRLLLKYLGVEYHDKRYHvgpapnfdrsew-----lsekftlgldfPNLPYYMDG-DLKLTQSGAI 76  pork tapeworm
AAT09082    9 ITVGYWHIRGLAAPLRMMCSFKSAKWENKTYElsakegggwdasswfgkdkpelkkknplINLPYVVHK-GKVVTQTNAI 87  Bigelowiella natans
CAD90167    2 STLGYWNIRGLGQPIRLLLNYVGEEFDDVQYElgdapdysreew-----lsvkntlglafPNIPYYIDD-DIKITQSNSI 75  Pacific oyster
AAT76663    3 PVLGYWKTRALCQPIRLMLGYTGTEFEEKNYPvgdapdydksew-----lavkfklglafPNLPYYIDG-DVKITQSKAI 76  Pacific white shrimp
Feature 1           
1IYI_D     67 ARYLTK 72  human
BAA36351   70 CWYVGK 75  Japanese oak silkmoth
AAO51029   74 TKWVGD 79  Dictyostelium discoideum
AAO51292   70 ARYIAK 75  Dictyostelium discoideum
1UA5_A     72 IRYIAD 77  Schistosoma japonicum
AAB21173   72 LRYIAD 77  Schistosoma mansoni
AAM64045   77 LEYIAD 82  pork tapeworm
AAT09082   88 FMYLAK 93  Bigelowiella natans
CAD90167   76 LRYIGD 81  Pacific oyster
AAT76663   77 MRYLAR 82  Pacific white shrimp

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