1M2A,1F37


Conserved Protein Domain Family
TRX_Fd_family

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cd02980: TRX_Fd_family 
Click on image for an interactive view with Cn3D
Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE). TRX-like Fds are soluble low-potential electron carriers containing a single [2Fe-2S] cluster. The exact role of TRX-like Fd is still unclear. It has been suggested that it may be involved in nitrogen fixation. Its homologous domains in large redox enzymes (such as Nuo and hydrogenases) function as electron carriers.
Statistics
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PSSM-Id: 239278
Aligned: 313 rows
Threshold Bit Score: 29.9029
Created: 16-Mar-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:[2Fe-2S] cluster binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #            #                                    #   #                    
1M2A_A        4 KHVFVCVQdrppghpqgsCAQrg----sREVFQAFMEKIqtdpqlfmttVITPTGCMNACMMGPVVVVYp---dGVWYGQ 76  Aquifex aeolicus
ZP_00532999   3 KQIIVGLGs---------CGIaa---gaGKVYAKAQSLIetgn---ievDLKQTSCIGMCYREPLVEVVdd-ngHYIYGD 66  Chlorobium phaeo...
ZP_00575977  28 AKIVVGMGt---------CGIaa---gaREVMNAILDEVakrq--ltgvTVSQTSCIGLCAQEPLVDVIlpgqpKVTYGK 93  Moorella thermoa...
NP_227827    33 GKITVAMGt---------CGIaa---gaKETLKAIVEALneyn--indiAVVQSGCMGLCEVEPTVEVRlegqePVIYGR 98  Thermotoga marit...
CAG35412     28 TVIYIGAAt---------CGRsa---gaLKTKKAFETELakqn---vkaEIVEVGCFGPCYTEPLICIArpgktKLFFQN 92  Desulfotalea psy...
AAO38266     20 PVIHIGMAt---------CGLas---gaKALHELILKEVasrn---lavKVVPTGCIGMCHNEPLVDITmpgknRVSYRN 84  Leptospirillum f...
AAB86023     21 PTIFIGSAt---------CGRsagaqkiEEIMGQRAAELsv------ecRMIHTGCMGLCYAEPMVVVFngdsrGYIYGP 85  Methanothermobac...
ZP_00675985  29 IIVSVSLAt---------CGIas---ggNMVMEAMKDEVarqg--idnvEFIRVGCMTYCHSEPTVEVSlpgrePLVFGK 94  Pelobacter propi...
AAA87055     28 TIINVSLAt---------CSIaa---ggKVAMEAMQDEVakng--ltgvEFMQSSCMTYCYAEPTVEITlpgkdPVVFGG 93  Desulfovibrio fr...
ZP_00531244   9 LEIIVGEGt---------CGIaa---gsKDVIDIFTELApe-------aAIKSVGCAGMCHDEVMVEIIdekrgACLYRK 69  Chlorobium phaeo...
Feature 1                    
1M2A_A       77 VkpEDVDEIVEKH 89  Aquifex aeolicus
ZP_00532999  67 IdeKKIEELLEKH 79  Chlorobium phaeobacteroides BS1
ZP_00575977  94 VdaAKAREIVGRH 106 Moorella thermoacetica ATCC 39073
NP_227827    99 VtpENAKRIVKMH 111 Thermotoga maritima MSB8
CAG35412     93 VdgERAEELVTGY 105 Desulfotalea psychrophila LSv54
AAO38266     85 VkpNTLTQILDAH 97  Leptospirillum ferrooxidans
AAB86023     86 VnrKLAKRIIQEH 98  Methanothermobacter thermautotrophicus str. Delta H
ZP_00675985  95 LdeNGARQLVQKY 107 Pelobacter propionicus DSM 2379
AAA87055     94 VdeNRARELVTEY 106 Desulfovibrio fructosovorans
ZP_00531244  70 VdkKNIPDLLSFH 82  Chlorobium phaeobacteroides BS1

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