1A8L,1J08


Conserved Protein Domain Family
PfPDO_like_N

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cd02975: PfPDO_like_N 
Click on image for an interactive view with Cn3D
Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Statistics
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PSSM-Id: 239273
Aligned: 10 rows
Threshold Bit Score: 134.44
Created: 8-Aug-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
catalytic
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic residues [active site]
Evidence:
  • Comment:CXXC motif
  • Comment:The N-terminal active site CXXC motif of PfPDO is required for its isomerase activity.
  • Citation:PMID 9665175

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                 #  #                                  
1A8L          2 GLISDADKKVIKEe-----FFSKMVN--PVKLIVFVRKD--HCQYCDQLKQLVQELSELt------DKLSYEIVDFdtpE 66  Pyrococcus furiosus
1J08_A        2 GLISEEDKRIIKEe-----FFSKMVN--PVKLIVFIGKE--HCQYCDQLKQLVQELSELt------DKLSYEIVDFdtpE 66  Pyrococcus horik...
NP_147485     7 LDLSEDFRRELRE------TLAEMVN--PVEVHVFLSKS--GCETCEDTLRLMKLFEEEsptrnggKLLKLNVYYRe--S 74  Aeropyrum pernix K1
NP_213313     1 MLLNLDVRMQLKEl-----AQKEFKE--PVSIKLFSQAI--GCESCQTAEELLKETVEVigeavgqDKIKLDIYSPf--T 69  Aquifex aeolicus...
NP_228677     2 GILSDKDIAYLKDl-----FGKELKR--KVKIVFFKTEDktRCQYCEITEQVLEELVSVd------PKLELEIHDFd--S 66  Thermotoga marit...
YP_004461     2 ALLGPKEQEIVRErlanltRDVEMVLftDSSTLIAPGKE--PCLYCKETKQLLEELSALs------DKLHLVVYDLatpE 73  Thermus thermoph...
NP_341748     7 ELFSDEVKNALQD------ALKDMKN--PVDVYVFVDNTdsNCQYCGVTTKFLEFMASAapkdsngSLLKVHIVDRaneN 78  Sulfolobus solfa...
NP_393603     3 NLIRKEDREYLKGe-----FEKYLKN--DVDLVVFTSNDe-NCRYCKETVQLATEVSEIn------PKIHLKVYNFd--E 66  Thermoplasma aci...
EAM93561      2 SLIRDEDAKFLREd-----FDKKLKN--TVDLVVFSSESs-DCKYCKDTISLVDEVGALs------DKINIVKYVYe--K 65  Ferroplasma acid...
ZP_00356877   2 ALMQEKDRKAVQG------AFTGLNR--PVDIVLFTSAE--SGEYSEVTQELLQEVVALh------PMLSLHVYDLd--Q 63  Chloroflexus aur...
Feature 1                                                          
1A8L         67 GKELAKRYRIDRAPATTITqd--gkDFGVRYFGLPAGHEFAAFLEDIVDVS 115 Pyrococcus furiosus
1J08_A       67 GKELAEKYRIDRAPATTITqd--gkDFGVRYFGIPAGHEFAAFLEDIVDVS 115 Pyrococcus horikoshii
NP_147485    75 DSDKFSEFKVERVPTVAFL------GGEVRWTGIPAGEEIRALVEVIMRLS 119 Aeropyrum pernix K1
NP_213313    70 HKEETEKYGVDRVPTIVIEgd---kDYGIRYIGLPAGLEFTTLINGIFHVS 117 Aquifex aeolicus VF5
NP_228677    67 DKEAVEKYQVEMVPATILLped-gkDYGIRFYGVPSGHEFGTLIQDIITVS 116 Thermotoga maritima MSB8
YP_004461    74 GKEKAGAYKVEAAPTLILRekg-seAINLRYRGIPAGYEFASLLEDIEMLG 123 Thermus thermophilus HB27
NP_341748    79 SRKIFEEFNVERVPTVAFY------NGYIRWTGAPLGEEIRALVETIVRLS 123 Sulfolobus solfataricus P2
NP_393603    67 DKEMVKKYGVEKYPATIVSkag-veDGRIVYYGLPSGYEFGSLIEDLKNVS 116 Thermoplasma acidophilum DSM 1728
EAM93561     66 DKEMVEKYGVEKYPATIVArhd-dkDGRIIYYGIPSGYEFGSLIEDLENVS 115 Ferroplasma acidarmanus Fer1
ZP_00356877  64 DSAYAAELGVDKAPGIVFLvgeerqNHGLRFAGLPSGYEFASLIEAIRLAG 114 Chloroflexus aurantiacus

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