1FO5,1HYU,1A8L,1NHO,1J08,1ZYP


Conserved Protein Domain Family
TRX_GRX_like

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cd02973: TRX_GRX_like 
Click on image for an interactive view with Cn3D
Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacterial AhpF, which has a similar fold as PfPDO with two TRX-fold subdomains but without the second CXXC motif.
Statistics
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PSSM-Id: 239271
Aligned: 43 rows
Threshold Bit Score: 75.2988
Created: 19-Jan-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
catalytic
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic residues [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #  #                                                       
1FO5_A        4 VKIELFTSPMCPHCPAAKRVveevanempDAVEVEYINVMENPQKAMEYgimAVPTIVINg-DVEFIGA 71  Methanocaldococcus jannaschii
BAB80489    479 TNIKVCVSLSCHLCPDVVVSaqri-akenKNIEAEMIDLANFKDIKDEFkimSVPALIVNn-KDVYFGS 545 Clostridium perfringens str...
NP_602775   467 VNIKIGISLSCTKCPKTVQAtqri-atlnKNVEMEMINIFTFQDFKNRYdimSVPAIIVDd-QHIYFGE 533 Fusobacterium nucleatum sub...
ZP_00063808 483 TDLNIGVSLTCHFCPDVVAAcqhi-aainDNVTAEMIDLQLFPELRESHhimSVPAMIINnsDNVIFGS 550 Leuconostoc mesenteroides s...
AAO77917    124 IHLVTYVSLTCTNCPDVVQAlnam-ttlnPSITHEMVDGALYQDEVDALkiqGVPSVFADg-KLLHVGR 190 Bacteroides thetaiotaomicro...
NP_816368   483 RKIEIFVSLTCHFCPDVVAAcqri-asinPHVEAEMVDISLFPELKKEKkimSVPAMLIDg-EQMIFGS 549 Enterococcus faecalis V583
AAQ65803    118 IELKTYVSLSCTNCPDVVQTlnmi-ailnPTINHTMVDGSFFPDEVESLgiaSVPTVMAGd-EVIHVGR 184 Porphyromonas gingivalis W83
NP_969325   119 ITIQSYISLTCENCPEVVQAlnqi-alihGSLRHEIIDGGYVQDDIKTLgiqGVPSLVANa-KMFHSGR 185 Bdellovibrio bacteriovorus ...
ZP_00375687 119 LDFEMFFSLSCHNCPDVVQAltlm-alenPNISATLIEGGTFQDEVDRRdvmAVPATFLNg-EPFFNGK 185 Erythrobacter litoralis HTC...
ZP_00560203 498 VNFKIGVSLSCTLCPDVVTLaqlm-alknPLIEAEMIDVAHYPDFKNKYgimSVPAIVVNd-EKVVFGK 564 Desulfitobacterium hafniens...

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