1DSB,1EEJ,1R4W,1Z6M,1A2J,1BED,1JZD,1T3B,1TJD,1V58,1R4W


Conserved Protein Domain Family
DsbA_family

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cd02972: DsbA_family 
Click on image for an interactive view with Cn3D
DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Statistics
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PSSM-Id: 239270
Aligned: 495 rows
Threshold Bit Score: 29.6812
Created: 10-Dec-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
catalytic
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic residues [active site]
Evidence:
  • Comment:based on known function of DsbA
  • Comment:CXXC motif
  • Citation:PMID 9655827

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               #  #                                                                    
1DSB_A       22 VLEFFSFFCPHCYQFEEvlhisdnvkkklpegVKMTKYHVNFmggd---------------------------------- 67  Escherichia coli
AAO82379      4 IYLFVNPLGGVCLEIEKeiiql------svndKKKIQLRFIPllnmktineflsrqhipindi----------------- 60  Enterococcus fae...
YP_193554     4 IFLFINPIGIYCYDTEKqirkt-----mdelgVDVCYHYIPIanvclvnddlirrrkdaqklp----------------- 61  Lactobacillus ac...
EAN08557      4 IYLFVNPLGEYCFEMEQqllqfie-eeygtpsKEKMQFRFLPlvnlqtigdvmqqkgisqnnl----------------- 65  Enterococcus fae...
ZP_00323154   4 TYLFITPWGDECFNCEKetir-------yfkyAEEKVDFKIItvlnmnvvlkfikrnqlkda------------------ 58  Pediococcus pent...
AAU38762      4 ITTFTDPMMGLSYESEPffrkle---thfaghIEFHTVMAGLvrnvyefvnpadlaiseamaierylphlaai--ynaeq 78  Mannheimia succi...
ZP_00063254   4 IYHFDTPLSDNCLITEQylqk-------isqqIHRSHHLFFVplinepilkmikddnsscad------------------ 58  Leuconostoc mese...
CAD64565      4 VYLFVNPLANQCVRDEQnvlrl------andsDKQIQFQFVPllninviqralkcqgikasdw----------------- 60  Lactobacillus pl...
ZP_00310964  55 VIYYTDPICSSCWGIEPqlrklk---leygtsIDIEYRMGGLlpdwsynsggiskpsdvahhwdev-------------- 117 Cytophaga hutchi...
CAD63832      6 IMTVADPMMGLLWETWPthrkle---thfnyqIDFTTLMGQLvpdvyalvdqatlsqygkkvalnqywvklmqiylqeas 82  Lactobacillus pl...
Feature 1                                                                                       
1DSB_A       68 ----------------------lgkDLTQAWAVamalgveDKVTVPLfegvqktqtirsasdirdvfin-agikgeeyda 124 Escherichia coli
AAO82379     61 ----krrnrifedlysaaldykaaqLQGRKKGRql----lIGLQKAVaedglayspelseelllaag-----gdidmyrk 127 Enterococcus fae...
YP_193554    62 ----disrfssatyqalqdyhaiklAYGNKKARky----lYELQKSLshdasvyspellkkittdlni----kssslesi 129 Lactobacillus ac...
EAN08557     66 ----eernhlfsmtysaaldckaaqFQGKKKGRrf----lIKLQEAVgcndipysqelaesifeeig-----gdlnmfke 132 Enterococcus fae...
ZP_00323154  59 -----nynelfnrmyltsldykaasYQGKAKGRaf----lMAMQNAIidnnvpysfelgstiarqag-----ldtamfee 124 Pediococcus pent...
AAU38762     79 sisgmpismenldlfstdrtssiplNLAYKTVQqlapekaDEFLYRLrfativevrpttklnelarvagqvgineqtfln 158 Mannheimia succi...
ZP_00063254  59 -----eptdkaslvyrltldfkaaqIEGNKKARal----lINLQEALtvghqkysrnlviniakkvg-----initdfly 124 Leuconostoc mese...
CAD64565     61 ----haqnqqsqtlyrvildykaalFQGKKRGRnf----lIALQSAMlktgqhyseelvktvatncq-----idldmfme 127 Lactobacillus pl...
ZP_00310964 118 -svyydmpidggvwledplpssyppSIAFKAVQiqsteraILFLREIremvflqkkniakwehleqaak-ntgvnieqfk 195 Cytophaga hutchi...
CAD63832     83 lagmpiqmgqgerffdadhtsstplSKGLRVISkqnsrleDQVLYELqydtvirnrqtndvnylkrlakkfgfsetqfmt 162 Lactobacillus pl...
Feature 1                                                           
1DSB_A      125 awnsfvvkslvaQQEKAAADVQlRGVPAMFVNg-------------KYQLNP 163 Escherichia coli
AAO82379    128 drqsdfvkesfqTDQKVAREMGiKQHPTAVVYnytcendfgilvenFENMDE 179 Enterococcus faecalis V583
YP_193554   130 kqddyiirasieEDQKLANQWNiKATPTVVLFdensdq--ngilldGPINQH 179 Lactobacillus acidophilus NCFM
EAN08557    133 drqsdfvkevffSDQKIAREMGiTKHPSAVVYnyacdrdfgvlvevKGTSSL 184 Enterococcus faecium DO
ZP_00323154 125 drqskmtqedfkRDQKLAHEMGaEDIPAAVIFnlkdee--cgvlmdHYDYQT 174 Pediococcus pentosaceus ATCC 25745
AAU38762    159 ayhlddvkasltEDFQRFQQLGiRGLPAYLLEyqgkrvvvngvlddRQFFTL 210 Mannheimia succiniciproducens MBEL55E
ZP_00063254 125 nrnsketmqailEDQQLAHGMMpKVQATVAIDdavdlk--tqiltdFSVNDL 174 Leuconostoc mesenteroides subsp. mesenteroid...
CAD64565    128 drdsdlakqafhADQRLASEMNiTEASSAVVFdcdqydy-gvllehFNYTTL 178 Lactobacillus plantarum WCFS1
ZP_00310964 196 kdyegrakdlfyADLKLARDLGvHGFPTMIFSdstgkn---etvygYKPYAV 244 Cytophaga hutchinsonii
CAD63832    163 tyqsselaanldEERQVVSRLKiNQLPAYVVTyneqsyvikgvlkyKEWLDI 214 Lactobacillus plantarum WCFS1

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