1UC7,1VRS


Conserved Protein Domain Family
DsbDgamma

?
cd02953: DsbDgamma 
Click on image for an interactive view with Cn3D
DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Statistics
?
PSSM-Id: 239251
Aligned: 60 rows
Threshold Bit Score: 107.303
Created: 13-Oct-2004
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
catalyticDsbD alpha
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic residues [active site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                               #  #                                                    
1UC7_A       16 VDELNQALVEakgKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTandaqDVALLKHLNVLGLPTIL 93  Escherichia coli
1VRS_D       19 VDELNQALVEakgKPVMLDLYADWCVASKEFEKYTFSDPQVQKALA--DTVLLQANVTandaqDVALLKHLNVLGLPTIL 96  Escherichia coli
NP_719201    73 PEKIAPLVAQg--YTVFVDITSDWCSICQTNKAEVTHREQVVNALMadDIILMQGNWSeadntIAGYMQYEGIPGTPYNK 150 Shewanella oneid...
NP_870199   771 EAKLKQYQAEg--RTVMIDFTAKWCVNCIVNYNVALNTEPTRQLIEelDAVPMLADWTdqdaeIEAKLKELQSRSIPVLA 848 Rhodopirellula b...
ZP_00208193 575 PMTLARLISDg--KVVFVDVTADWCITCKVNKAAVIERGEVAKRLSspGVVALRADWTkpdegISRYLASFGRYGIPFNA 652 Magnetospirillum...
ZP_00270650 605 PEAVARLVAEg--KTVLVDVTAQWCVTCKVNKATVLDAAPTRALLDsgRLSGLRADWTrpdpaIAAYLASFGRFGIPFNA 682 Rhodospirillum r...
YP_154605   586 QQRIDEAVANg--QTVFVDVTADWCVTCQANKVGVLLQDPVFTALGkeHVTRLRGDWTkanesITQYLKANNTFGVPFNK 663 Idiomarina loihi...
YP_206282   317 ERTIDDYVKQg--KTVFVNVSADWCITCKTNKIGVILQNPVYPALQqeNVITMQGDWThpshkITEYLKKHQRYGVPLTV 394 Vibrio fischeri ...
ZP_00531304 635 PSLFEELLEKk--KTVFLEFTADWCITCKVLEASVLGNNDVVEALHrpDVAAVRADWTsrddaVTALMQRFGRSGVPLFV 712 Chlorobium phaeo...
ZP_00585174  71 ADKIPMLVQGg--YTVFVDLHSDWCMACQTNRVGILHRPEVVSTLLsgKVVLMQANWSqeserIAPHYGKVAAPGSPFNK 148 Shewanella amazo...
Feature 1                                   
1UC7_A       94 FFDgqgQEHPQARVTGFMdaETFSAHLR 121 Escherichia coli
1VRS_D       97 FFDgqgQEHPQARVTGFMdaETFSAHLR 124 Escherichia coli
NP_719201   151 IYGp--RNPNGIVLPSKLtiEAVINGLA 176 Shewanella oneidensis MR-1
NP_870199   849 IYPg-kSPAEPIVLRDLVsqQMVLDALE 875 Rhodopirellula baltica SH 1
ZP_00208193 653 VYGp--SAPDGIALPELPgeADILAAMD 678 Magnetospirillum magnetotacticum MS-1
ZP_00270650 683 VYGp--GAPQGIALPELLseNALLEAVA 708 Rhodospirillum rubrum
YP_154605   664 VYGp--GAPDGITLPVVLskDKVMDALE 689 Idiomarina loihiensis L2TR
YP_206282   395 VYGp--NTPQGLTLPVLLdgDEVIHALN 420 Vibrio fischeri ES114
ZP_00531304 713 IIPh-gELDRAVVLPEVVtvDMLLRELE 739 Chlorobium phaeobacteroides BS1
ZP_00585174 149 VYGp--GLPRGQILPAELsaSDVITAIR 174 Shewanella amazonensis SB2B

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap