1Q16


Conserved Protein Domain Family
MopB_CT_Nitrate-R-NarG-like

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cd02776: MopB_CT_Nitrate-R-NarG-like 
Click on image for an interactive view with Cn3D
Respiratory nitrate reductase A (NarGHI), alpha chain (NarG) and related proteins. Under anaerobic conditions in the presence of nitrate, E. coli synthesizes the cytoplasmic membrane-bound quinol-nitrate oxidoreductase (NarGHI), which reduces nitrate to nitrite and forms part of a redox loop generating a proton-motive force. Found in prokaryotes and some archaea, NarGHI usually functions as a heterotrimer. The alpha chain contains the molybdenum cofactor-containing Mo-bisMGD catalytic subunit. This CD (MopB_CT_Nitrate-R-NarG-like) is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Statistics
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PSSM-Id: 239177
Aligned: 16 rows
Threshold Bit Score: 189.125
Created: 2-Jun-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
molybdopterin
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:molybdopterin cofactor binding site
Evidence:
  • Structure:1Q16; E. coli respiratory nitrate reductase A, alpha chain binds Mo and 2 MGD analogs.
  • Comment:defined by 3.5 Angstrom contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             ####  #####                                                              # 
1Q16_A      1086 ALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQrVPAGMTMMYHA 1165 Escherichia coli
ZP_00241747 1101 VLNFITPHQKWGIHSTYSDNLMMLTLNRGGPVIWLSEEDAKAAGIADNDWVELFNVNGAISARAVVSQrVKPGMTMMYHA 1180 Rubrivivax gel...
YP_223631   1088 VLNFITPHQKWGIHSTYSDNLLMLTLNRGGPVVWIAEPDAARAGIADNDWVEIYNSNGAIVARAVVSQrMREGTTFMYHA 1167 Brucella abort...
CAA71210    1047 LMNYITPHGKWSIHSTYSENHRMMTLSRGGYPVWLNDKDAAELGIRDNDWVELFNDNGVFVQRAIVSArIPRGTVFVYHA 1126 Thermus thermo...
AAQ14969    1053 VLNYITPHGKWNIHSTYKDNHRMLMLSRGMDPVWINDRDAEKVGIEDNDWVEVYNDNGVVVTRANVSRrIQPGTCMYYHA 1132 Nitrobacter vu...
AAK76387     842 PFKITGGHPRVSIHSTHLTNSHLSRLHRGQPVVHMNSKDAAELGIKDGDMAKLFNDFADCEIMVRTAPnVQPKQCIVYFW 921  Azoarcus sp. EB1
AAO49008     785 PFRFNSPHSRHSIHSTFKDSVLMLRLQRGGPCVEISPIDATAIGVKDNDWVEIWNSHGKVICRAKIRAgEQRGRVSMWHT 864  Dechloromonas ...
CAF21906     840 PMEYNTPHGRWAIHSTWRDSEKLLRLQRGEPLLYLHPEDAEERGIEDGDSVEVFNDLAEVELQAKIYPsSQRGTARMYFA 919  Haloferax medi...
P60068       780 PFVRNSPHARWGVHSFARTEQWMLRHQRGEPDVRMSPKAMAAKGIKDGDMVRIFNDSGEFFAVVKAMPaLPDNMLFTEHG 859  Ideonella dech...
NP_215677   1084 TVRYLTPHSKWSFHSTYQDNLYMLSLSRGGPTMWMSPGDAAKINVRDNDWVEAVNANGIYVCRAIVSHrMPEGVVFVYHV 1163 Mycobacterium ...
Feature 1                            #                                    ##          
1Q16_A      1166 qerivnlpgseitqqrgGIHNSVTRItPKPTHMIGGYa----HLAYGfn-yyGTVGSNR---DEFVVVR 1226 Escherichia coli
ZP_00241747 1181 qekiinapgseitgvrgGIHNSVTRIvTKPTHMIGGYa----QYSYGfn-yyGTIGTNR---DEFVVVR 1241 Rubrivivax gelatinosus PM1
YP_223631   1168 qekivntpgspltgqhgGIHNSVTRViTKPTHMIGGYa----HQAYGfn-yyGTVGSNR---DEFVVVR 1228 Brucella abortus biovar 1...
CAA71210    1127 tertvgipksplrgkraGMNNSITRArLKPVLMSGGYa----QFTYAfn-ywGPVGVNR---DTWVYVR 1187 Thermus thermophilus
AAQ14969    1133 vertvyipksqerkwrgGGHNSLTRTrINPLFLAGGYa----QFTYGfnywgPTGIFTR---DTHVVVR 1194 Nitrobacter vulgaris
AAK76387     922 dahq---------ykgwKPYDILLIGmPKPLHLAGGYe----QFRYYfm--nGSPAPVT---DRGVRVS 972  Azoarcus sp. EB1
AAO49008     865 pelym--------dlleGSTQSVCPVrITPTHLVGNYg----HLVFRpn-yyGPAGSQR---DVRVDVK 917  Dechloromonas agitata
CAF21906     920 werfq--------fdsdSNFNSLVPMyMKPTQLVQYPedsgeHLHFFpn-ywGPTGVNS---DVRVDVR 976  Haloferax mediterranei
P60068       860 weqyq--------yknmTHYNMVSSElINPLELVGGYg----HIKYTs----GGFNPNRifyETTVDVE 912  Ideonella dechloratans
NP_215677   1164 qertvdtprtetngkrgGNHNALTRVrIKPSHLAGGYg----QHAFAfn-ylGPTGNQR---DEVTVVR 1224 Mycobacterium tuberculosi...

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