Conserved Protein Domain Family
MopB_NDH-1_NuoG2

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cd02772: MopB_NDH-1_NuoG2 
MopB_NDH-1_NuoG2: The second domain of the NuoG subunit of the NADH-quinone oxidoreductase/NADH dehydrogenase-1 (NDH-1), found in beta- and gammaproteobacteria. The NDH-1 is the first energy-transducting complex in the respiratory chain and functions as a redox pump that uses the redox energy to translocate H+ ions across the membrane, resulting in a significant contribution to energy production. In Escherichia coli NDH-1, the largest subunit is encoded by the nuoG gene, and is part of the 14 distinct subunits constituting the functional enzyme. The NuoG subunit is made of two domains: the first contains three binding sites for FeS clusters (the fer2 domain), the second domain (this CD), is of unknown function or, as postulated, has lost an ancestral formate dehydrogenase activity that became redundant during the evolution of the complex I enzyme. Although only vestigial sequence evidence remains of a molybdopterin binding site, this protein domain belongs to the molybdopterin_binding (MopB) superfamily of proteins.
Statistics
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PSSM-Id: 239173
Aligned: 14 rows
Threshold Bit Score: 539.248
Created: 29-Apr-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_00244946 220 KSVSPHDSTGANLIVQvknh------qvmRVVPLeneAVNECWIADRDRFSYEALNtdeRLTAPMIKhdg-qwrTVDWNT 292 Rubrivivax gelat...
AAQ58621    220 KSVSPHDGLGSNLVVQvksn------evmRVLPLeneAINECWIADRDRFSYEGLNsaeRLQKPMIKfdg-kwhETDWET 292 Chromobacterium ...
CAD15763    220 KSVSPHDGLGANVIVQtknq------rvmRVLPLendAINECWLSDKDRFAYEGLNsdeRLTQPMLKqgg-qwqTVDWTT 292 Ralstonia solana...
ZP_00041892 232 QSLGYHDAMGSNLFLHvrqg------evlRTVPRdneYVNECWLSDRDRYSHQGLYaadRAVKPLKKvgg-qwlEVSWAE 304 Xylella fastidio...
CAE41150    220 RSVSPHDSMGANLVVQvkgd------calRVVPFeneALNECWISDRDRFSYEGLNsddRLAAPMIKgadgkwqEASWAD 293 Bordetella pertu...
ZP_00201818 219 PSIAPHDGLGSHIEVHvkdg------kvlRVLPRekeTINECWLSDRDRFSYEGLNspdRLKVPMVKhng-vwhETDWKT 291 Methylobacillus ...
YP_096780   219 DSVAPHDCLGSNVHIHtrnn------klmRVVPReneSINETWLSDRDRFSYLGLNavsRASKPQIKkng-qweAVDWET 291 Legionella pneum...
YP_208778   220 KSVSAHDALGSNLIVQtkdh------tvrRVLPLeneAINECWLSDRDRFAYEGLYhesRLKNPKIKqgg-ewmDVDWKT 292 Neisseria gonorr...
NP_820425   219 PSIAPHDCVGGNIFLHsrwqefvpqrevmRAVPRendEVNETWMSDRDRFGHFAVYhesRLYQPRIKkdg-kweAISWED 297 Coxiella burneti...
ZP_00335695 221 PSISPHDSLGSNLEVHvknn------kvmRVVPReneDVNECWLADRDRFSYEGLNtaeRLTWPMIKqdg-qwiETDWRT 293 Thiobacillus den...
ZP_00244946 293 ALEYVANGLKSiqsehgaasIGALATahSTVEELYLLGQLVrGVGSDNIDHRLRHAEFDTVekar---wlgTSIESLSTL 369 Rubrivivax gelat...
AAQ58621    293 ALNYVVKGLSGvsadhgkdaIGFLLNphSTTEELHLAQKLArAFGVEAVDYRLGRSDFSADsakqgaewlgSSIVELAEA 372 Chromobacterium ...
CAD15763    293 ALEYVANGLNAikrdhgaeqIGALASphSTLEELFLLQKLVrGIGSDSVDFRLRQSDFSAKptga--pwlgMPIADVSLL 370 Ralstonia solana...
ZP_00041892 305 GVSAAVEILSAhrg----daLGVLVHpaTSNEEGVLLARLAaGLGTGHLDHRIFNRDFSDVavae---pfaLPLAEIGNA 377 Xylella fastidio...
CAE41150    294 ALQAVAQGLSRvresfgagqIGALASeyATTEEFSLLGRLVrALGSENIDFRLRQTDAGFDaalsgapwlgMPVAELDNL 373 Bordetella pertu...
ZP_00201818 292 ALELAAGQIKDivnneggdaLGVLVSpnSTMEEAYLATRFAnGLGSDNVDYRLRHADFRHDgkrlgviwmgCNIPEVQEM 371 Methylobacillus ...
YP_096780   292 ALKFAAEGISRvikqhgpeqMAAFASssSTLEEMYLLQKLMrELGVQNLDHRLQQIDFRDQaflpttpvstLPYAEIDHQ 371 Legionella pneum...
YP_208778   293 ALEYVRSAIECiakdgnqnqVGVWANpmNTVEELYLAKKFAdGLGVKNFATRLRQQDKRLSdglkgaqwlgQSIESLADN 372 Neisseria gonorr...
NP_820425   298 ALRIVKEKTQAiiekhgasqTGALLSpsATIEEYFLFQKWLrGLGSHNIDHRVRWQDFRDQntfdafpnlgMPITELENL 377 Coxiella burneti...
ZP_00335695 294 ALQYVADRLKAipp----eqIGALSTphRPAEELFLLQKLMrGMGSGNVDHRLRQSDFALDakaqggfwlgMPVTYMSRL 369 Thiobacillus den...
ZP_00244946 370 DRAFVIGsFLRKDhplfAQRLRQAAkh-gaQVSSLHALaddwlmpistQFTAAPs-AWVAALAGVAAavashtgaaapva 447 Rubrivivax gelat...
AAQ58621    373 KSVLVVGsTLRKEqpllASRLRQSVkk-ggELNIIHVAddnlltqikgKLIVSPl-ALVNALSQVLKavaeiksgaseid 450 Chromobacterium ...
CAD15763    371 QRTLVVGaFLRKDhpllAARLRQGGkk-gaQLSVIGAGgedl--lmpaTQLLGApsQWLSLLSEVAVaiaaansvarpvg 447 Ralstonia solana...
ZP_00041892 378 DLVVLFGsNIRQElpllHARLRKAVtcngaKVYAVNPVdfdftfsltgKSIVPPs-QLANALTDTALln----------- 445 Xylella fastidio...
CAE41150    374 DRVLVIGsFLRKDhplmAQRLRQAAkr-gtQVLLLDAAaddplmpvagRLTVAPs-GLASALAEVAValaqakgqavpae 451 Bordetella pertu...
ZP_00201818 372 DRILVIGsNLRNEhpllAQRIRRAVan-gaELSVVNPLdddplipvkhKAICSPn-DMVNVLSQILKavsgmerlslclp 449 Methylobacillus ...
YP_096780   372 HSILLIGcNIHREvplaGTRVRKAFrn-gaKIYALNPVdfdyhfdlsgRVIISPl-EMPMQLAKLALalttelaslpeev 449 Legionella pneum...
YP_208778   373 DAVLVVGaNLRKEqpllTARLRRAAkd-rmALSVLAGSkeelfmpllsQEAAHPd-EWAGRLKNLSAdaeha-------- 442 Neisseria gonorr...
NP_820425   378 NAILLIGsNVRFEqpllSHRMNKAYge-gaKILAINPMdypfvfgineKMIVSPs-ALIPALADVAKalakeksse---- 451 Coxiella burneti...
ZP_00335695 370 NRMLVVGsNLRKDhplmAHRIREAVrw-ygELNLINAAddeflgkvhaKRIVAPs-QLAGALAGVCValaelknqavpki 447 Thiobacillus den...
ZP_00244946 448 -----------------aeasepakaiaasLLSGQRKAVLLGNaavqhPQASRLLALAQFIAeqtgatFGVLGEAANSVG 510 Rubrivivax gelat...
AAQ58621    451 la--------------avevsaearriaesLTGAETASVVLGNvaqrhPAYGQLLSLAQEISrlsgarFGILAEAANSVG 516 Chromobacterium ...
CAD15763    448 td--------------gieagevakriaasLASGERKAVFLGNaavahPQFSKLHALAQWVAqqtgatLGFLTEAANTVG 513 Ralstonia solana...
ZP_00041892 446 -----------------------------aTKAAARVVIVVGAlaenhPQGATLRAAARQFAevtgaaLCRIPQGANAIG 496 Xylella fastidio...
CAE41150    452 fa--------------avaagegakqiaasLASGSNAAVLLGNmavnaPQAATLAANAQAVAqlagakLGFLTAGGNTVG 517 Bordetella pertu...
ZP_00201818 450 kslsellegvrvwdnskaialsltghgetmDLVSPRSAVFLGNisqhhPRYTEIYSLAEAIAslcgatFGVLSAGANSVG 529 Methylobacillus ...
YP_096780   450 qkl------------liglevdkqtkqiaqSLKEEKACLITGAivenhPEASLLRTLVAIVQklsgakLVRLTTGANSAG 517 Legionella pneum...
YP_208778   443 --------------------------vtasLKNAEKAAVILGAevqnhPDYAAIYAAAQELAdatgavLGILPQAANSVG 496 Neisseria gonorr...
NP_820425   452 ----------------------kakviaetLVSAEKAAIFLGEhalhhPEAAKIREWAHFIAqqsgatVGLLTEGANSAG 509 Coxiella burneti...
ZP_00335695 448 aa--------------hgvvdevarkmaasLAGGETRAVFLGNmaqhhPAYSQIHALAQEVAalagasFGVLGEAANSVG 513 Thiobacillus den...
ZP_00244946 511 AQLVGaqpr---------sgglNAGQMLSQplkay----------lllnAEPVLDAADgrqaadtlaragmVVSLSAF-R 570 Rubrivivax gelat...
AAQ58621    517 AELVGalpk----------ngdNAAAMIAKpkkay----------fllnAEVEFDSYNpqaavaamkqaatVIALTAYkG 576 Chromobacterium ...
CAD15763    514 GYIAGalpq---------gnglDAAAMLAQprray----------vilgAEPEFDSANpqqaraalahadtVVMLSPFaS 574 Ralstonia solana...
ZP_00041892 497 LTQHGvlp-----------tgrDAAAMLVEpcqay----------vlygIEPGLDFADtatarq-alhgakVVAFSHFaC 554 Xylella fastidio...
CAE41150    518 GYLAGavpg---------kggkNAAAMLADplkay----------ivlhAEPSLDADNapqalaalrgaqfAVALTPYrS 578 Bordetella pertu...
ZP_00201818 530 ANLVGampk---------agglNARTMLESprkay----------mlvnVEPELDCGNpslavnalqqaecVVVLTAYrS 590 Methylobacillus ...
YP_096780   518 ACIAGmlph----------rtvAGKSIAEPgfnvqealnsklkgyllmgVEPGYDFANpagarqsmlaaefVVLLSAYeH 587 Legionella pneum...
YP_208778   497 ADVLGv---------------nSGESVAEMantpkq-------avlllnVEPEIDTVDgakavaalkqaksVMAFTPFvS 554 Neisseria gonorr...
NP_820425   510 AWLAGalphrrpggqrldspglDAKAMLTTdplka---------yfllnLEPEFDCAYpaqalhtlnqaewVVAFTTFtT 580 Coxiella burneti...
ZP_00335695 514 AVAVGaipgrgpl-gqpavaglNAQEMLAKplray----------lllgVEAELDTYDpvaamasidaadfVVVMSPYkG 582 Thiobacillus den...
ZP_00244946 571 NANLehADVLLPITPfTETSGSFvnaeGRVQGFHGvvrprGDARpaWKVLRVLGSML 627 Rubrivivax gelatinosus PM1
AAQ58621    577 QGLLdyADVLLPIAPfSETAGSFvnmeGKLQTFNGvvkplGETRpaWKVLRVLGNML 633 Chromobacterium violaceum ATCC 12472
CAD15763    575 RAAMehADVLLPVAPfTETSGTYinceGLPQSFNGvvrslGDSRpaWKVLRVLGNLL 631 Ralstonia solanacearum
ZP_00041892 555 ASTRdvADVILPIGLlPEIDGTLtnldGRTQAAKPggklpLEARegWRVLRALGGEL 611 Xylella fastidiosa Ann-1
CAE41150    579 AAQGw-ADVMLPVAPfTETSGTFvnaqGQPQSFKGtvapfGQTRpaWKVLRVLGNVL 634 Bordetella pertussis Tohama I
ZP_00201818 591 DALErdADILLPIVPfTETSGTFmsmeGRVQSFTAvtkalGEARpgWKVLRVLGNLA 647 Methylobacillus flagellatus KT
YP_096780   588 ESMHdyADVILPIAPyAETSGTYinidNTWQTVKGamlpfGESRpaWKVLRVLGNLL 644 Legionella pneumophila subsp. pneumophi...
YP_208778   555 ETLLdvCDVLLPIAPfTETSGSFinmeGRLQSFHGvvqgfGDSRpmWKVLRVLGNLF 611 Neisseria gonorrhoeae FA 1090
NP_820425   581 PTMEsyADILLPIAPfSESGGTYvnaeGRWQWASAasvpeKDAQpaWKVLRVLGNYF 637 Coxiella burnetii RSA 493
ZP_00335695 583 KSLDy-ADVLLPIAPwTETSGTFinteGRVQSFAAvvkplAETRpaWKVLRVLGNLL 638 Thiobacillus denitrificans ATCC 25259
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