Conserved Protein Domain Family
MopB_FmdB-FwdB

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cd02761: MopB_FmdB-FwdB 
The MopB_FmdB-FwdB CD contains the molybdenum/tungsten formylmethanofuran dehydrogenases, subunit B (FmdB/FwdB), and other related proteins. Formylmethanofuran dehydrogenase catalyzes the first step in methane formation from CO2 in methanogenic archaea and some eubacteria. Members of this CD belong to the molybdopterin_binding (MopB) superfamily of proteins.
Statistics
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PSSM-Id: 239162
Aligned: 18 rows
Threshold Bit Score: 389.77
Created: 18-Apr-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putativeputative
Feature 1:putative molybdopterin cofactor binding site [chemical binding site]
Evidence:
  • Comment:defined by similarity to the molybdopterin-binding superfamily of proteins

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                       #                                               
P61154        7 NVVCPFCGTLCDDLEILVEDNhivg-trhACRIGNAKFMHfegavRYTEPLMRenkkddfkKVDYETAIEETARLLTEAT 85  Methanocaldococc...
AAS17986     63 DIVCGFCGLGCDDLEVTVAGRait--prtACPEAARLLARnd--aPPPSPRINg------aPSSFEEAAAAAAGHLKAAR 132 Xanthobacter aut...
ZP_00172043  17 AVPYPADGLLSDDLTLARDANgnlslqspQCPQSKAFFERp---rSNTTPAIHg------kAATLEDAIAKASSLLQSAK 87  Methylobacillus ...
AAU91103     12 NVPSPFCGIASDDLRIEVCGSsvrv-lanGDAVTVPGFERp---vTDTAPRIAg------ePASLEDAVRRAAEILKEAR 81  Methylococcus ca...
ZP_00243502  12 AWTSPFCALLNDDLQLAQQDGrfsl-sgpGCERAQRALAHfrperSSATPSIAg------qPATLDEAIEQAAQRLAASR 84  Rubrivivax gelat...
ZP_00147931   5 YYVCTGCGLLCDDIEIELENGkvsk-vnnACLKGVARLKKc---dRPAECRINn------ePATLEAAIIEAARILKEAK 74  Methanococcoides...
NP_632083     5 YYVCTGCGMLCDDIEVDVENNkink-vytACRIGVAHMKDg---kESAAFLVDn------kPVDETTAISEAATILKNAK 74  Methanosarcina m...
AAU84107      1 MMVCTGCALLCDDIEVGENDCr------hACRIGDAHITSt----NQIDPMVNq------sPVDMGTAIKSAAEILVSAE 64  uncultured archa...
NP_070478     2 IMICPGCSCLCDDIYIKDGKVf------nACRRGEEIFAKyn--eNRAVARVDg------kEVDVDTAIEKAIEILKDAK 67  Archaeoglobus fu...
NP_616180     5 NIICPACGAACDDIQVEFKNGaie--aknICKVGNARFKAltssrRLKQPLIKfeg--klkSVSWDEALEKAADILVSAK 80  Methanosarcina a...
Feature 1              #                        # ###                             ## #  ##      
P61154       86 lPLIYGWSATecHAHMYGVELAElvgavidntASVCHGPSLLAVQDvgypVCTLGEVKNRADVIIFWGsNPMHAHPrhms 165 Methanocaldococc...
AAS17986    133 sAAFSGLGADl-EGLRRLYDLAMasgasldhaASGGLFANLERLARkgwiAATLAEVRNRCDVMVGSA-DPASAFSrff- 209 Xanthobacter aut...
ZP_00172043  88 hPLMAGLATDv-YGMRAVMNLAEtsgatidhmNSKSSMKNILVMQNsgwfVTTLSEVKNRVDLLVVIGtDIVSYFPrffe 166 Methylobacillus ...
AAU91103     82 lPVFSGFGTDv-NDTRAALALIDkvrgifdqaRAAGGVRNLLALADsgwiATTLAEVKNRVEVLLVFGsDVEAAFPrff- 159 Methylococcus ca...
ZP_00243502  85 qPLFGGLATDv-DGARALYPLACatgaicdaaGGAAQLHTLRALQDrgafTTTLAEVRNRADLIVCVGaSPRENFPglw- 162 Rubrivivax gelat...
ZP_00147931  75 sPVIFGMGNStsQAQKNAIEVAKktdayfddtSSFCQGPIVEAILEsrirTCTLDEVKDKADVIVYWGaDPSNSHPrhls 154 Methanococcoides...
NP_632083    75 nPLIFGLGTSsnEAQKLAIELAKktsatlddaSSFSLGEVIEALLNnktkVCTLDDVRNKADVSIFWGtDPSDSHPrqls 154 Methanosarcina m...
AAU84107     65 kPVFVGFGNSvtEAQVTGIELAEkvg----aeIKTFHTSIFDDILDgrvkTCTLPEVRDYADVIIFLGcDPMNTHPrlls 140 uncultured archa...
NP_070478    68 nPAIYGLDTTvvEAQSLAIEVAEklngyiddnSSFCLGELVEAVLKgeipTTTLDEVRDNAYVLVYWGtNPYHSLSrhms 147 Archaeoglobus fu...
NP_616180    81 rPLLFMGSDIscETHEIGLRIGEylgavvdsnTTLGNGPAAMGLQEsgktAATEGQKKNRGDLVVYWGtNPLESMPrqms 160 Methanosarcina a...
Feature 1                                     ####                      # #                     
P61154      166 rysVFARGffre--------rgreDRTLIVVDPRetdt------aklaDIHLQvepHKDYELVSAMRavlk--gfeLQVD 229 Methanocaldococc...
AAS17986    210 sraVPVRGegadgdaaplfvtapgRRQIAVVGGPlseas----rrvlaAHQVTevpVSEQDVATAASvlta-lvagRGVD 284 Xanthobacter aut...
ZP_00172043 167 rviWNKEAmfte---------ntaDREIVYLGGRdlntapgvspngkqPDVLPcdlDRVPEVLAALRaiva--gksLKAD 235 Methylobacillus ...
AAU91103    160 erfVWNREtlfg--------qdpaRREVICVGRApsgdaav-spdgrrPQVVEcdpRHLPELAAALSalar--gasLQAE 228 Methylococcus ca...
ZP_00243502 163 rrvGIGEPlv-------------aQREIVFLGGAtepald---glagvSQRSValsGDLFDSVAQLAa--------LVDG 218 Rubrivivax gelat...
ZP_00147931 155 kytYFPRGkerqr-------gweeDRTAICIDVRksdta-----ticgDKFYQippQADEELLNALTngl----sgKVPK 218 Methanococcoides...
NP_632083   155 kyaYFPRGtekqr-------gweeERTAICIDVRkshta-----kicgNYFFQippGGDAEFIDALIaal----agKLPK 218 Methanosarcina m...
AAU84107    141 ryaYYPRGekrqh-------gweeDRIAITIDPRfsht------asicKEAYTidpHRQIEFMDALMda------lLSKV 201 uncultured archa...
NP_070478   148 kytYYPRGkrrpr-------gydeDRYLVVVDVRkse---------taKLAKKnakFIQVESDAELVds-----fmKVVD 206 Archaeoglobus fu...
NP_616180   161 rygVFPRGywtg--------rgrfDRTVITVDPRktlt------seasDLHVQlkpNSDYELISGLLtllhgktphPSIE 226 Methanosarcina a...
Feature 1                                     #### #                              ##            
P61154      230 KVAGVPADLIYEAVEVckna---qfgELFFAMGVTMtrgkhRNIDNaiqLVIDLNAYTKFGLMPMRGHYNVNGFNQVLTW 306 Methanocaldococc...
AAS17986    285 GLTGLSDETVAALAALaeqikaaryaVFTWNAASLPaedapVVAGAaseAVDVLSVTTRAAVFPLGGRDNVTGAHQLALW 364 Xanthobacter aut...
ZP_00172043 236 NVAGIARESLEKLAERlkaa---kysVLAWTGSALDfphaeLSIQNivgVVQELNKTTRSAGLPLSGNDGDVTAYNVSTW 312 Methylobacillus ...
AAU91103    229 AVGGIPVVVLREIVERlrrs---sysVVTWVAGQLDfahadLTVQQvcqMVALLNKETRAAVLPLGGQDGDRTASQVCAW 305 Methylococcus ca...
ZP_00243502 219 RRVPCAAPALAELATQlhaa---ryaVVVWESSQLPeh-gaLIAEAlnrLVGTLNQRTRAALLPLSGKDGLQTVNYVFTW 294 Rubrivivax gelat...
ZP_00147931 219 VSFGMSPKKILELANMlkka---efgVICVGLGLVYs---lEEIEPlvrLMDKLNEVSNFHLIPMVGQYNMRGSNHNLHG 292 Methanococcoides...
NP_632083   219 TSYNFPPKRILELANIlkga---kfgVVFAGRGLVYs---lDNLEPlirLMNALNEKANFHLVPMIRQYNTRGFNENLFK 292 Methanosarcina m...
AAU84107    202 PKTTYDKKRILKLAGTlkka---efgVIFAGTGASAp---pRDAIVr--LMDRLNEFSDFHLLSLTPGYNLRSIAEQLRQ 273 uncultured archa...
NP_070478   207 GKAAKYAKEAGAIITEmkka---dfnVIFGGLGLKYg---lKDLNMfkeMVKKLNEVAKVYFIPAGFHGNMRGFNETLFE 280 Archaeoglobus fu...
NP_616180   227 EVTGIPIFLMERMLYMmknc---nfgSISVGVGLSSsigkhRNVEIamnLVKELNNYTKFTLGVLRSHCNAAGFNQIASG 303 Methanosarcina a...
Feature 1                                       ###   #                       ###  #            
P61154      307 VTGYPFGVDFsrGYPRYNPGETTANdllqrgeTDMMLNIASDPGAHFPqkavqhMAKIPLVCIDPHeTPTTq-LANIIIP 385 Methanocaldococc...
AAS17986    365 RFGYPLRTAV--GAGTSRHVPELYStaaalydADLLLHTSAFRPDAPPd-----FDRGPVIAIAHPdTVFAr-EPEVFIP 436 Xanthobacter aut...
ZP_00172043 313 ISGYPFRNSYrrGYPDYDPYHYDTSrllaegeTDVLVWISSFKPERLPp-----HSNVPTIVIGHP-AMQFehAPDVFIP 386 Methylobacillus ...
AAU91103    306 LTGYPTRVSFarGFPEYDPYLNDASrllkdgeADALVWVSSLSPAPPP------AAEVPTVVIGRSgMQFDe-EPEVYIP 378 Methylococcus ca...
ZP_00243502 295 LSGLPLRSRAgpLGLEHEPLRFDAKrllaegsVDALLWVSAFGPEPAAp-----SAPIPTVVLGHPaQQAGagADAVFIP 369 Rubrivivax gelat...
ZP_00147931 293 ETGYINRVKFt-GDDVEHGPHCSVVellrkrtVDAALIIGSDPMSSLPgsiakeLLDIPVITIDPCnTLTSr-KAKVSIP 370 Methanococcoides...
NP_632083   293 ETGYVNSVKFe-DGTVKHGPEYSVVeslkektVDAALIIGSDPFSILPrsiaknLLEVPVIVLDPCeTLTSr-NAKVYIS 370 Methanosarcina m...
AAU84107    274 LHNRPGDDDGgvGGDSSSSSGGMDLh-----eADCILCLGFDLMNSLPa----hGINGKIIVIDPNeTLTSr-YADVVIP 343 uncultured archa...
NP_070478   281 KVGYVNKYSFr-DGKSGEEFAFTELlknekidAALIVGTDPVYSLPFDvs--skLGKVKTIVIDPRmSFTAr-IADVVIP 356 Archaeoglobus fu...
NP_616180   304 MYGYPFGLDFmkGYPRYNPGEFTTAdllrerdVDAVFVIGTDLLNEVPadcaayLSEIPLICLDIVpCPTIi-VSDVVLP 382 Methanosarcina a...
Feature 1       ##     #                                       
P61154      386 PAIaGVEVEGTAYRMDGVPIQLRkvi-dpPEGVlpDREILKILIKKV 431 Methanocaldococcus jannaschii
AAS17986    437 VGTpGVDYGGHVFRMDSVVCLPLqa--lrPAELpsVAEVAAAILVSF 481 Xanthobacter autotrophicus
ZP_00172043 387 IAIpGLEANGAQFRSDSSVTLPLr----kLRDT--NLPTLADVLSAI 427 Methylobacillus flagellatus KT
AAU91103    379 VGVpGIDHAGHMYRCDNVVAMPLy----aLRDC--GLTTAAAVLAAI 419 Methylococcus capsulatus str. Bath
ZP_00243502 370 VSTpGMGSAGHLFRFDGGVALPLea--vyDDGLptVAQVLQRLNARV 414 Rubrivivax gelatinosus PM1
ZP_00147931 371 AATaGSECGGTAVRMDGVEVEFKam--ieTDRMc-DAEILERIMGEL 414 Methanococcoides burtonii DSM 6242
NP_632083   371 TAIdGVESGGSAIRMDGVKVDFKpa--veTKRPs-DETVLKKIMEAL 414 Methanosarcina mazei Go1
AAU84107    344 CAAgGIDCAGGAVRMDGETVDVPri--reSERLs-DIAILKQLLEVV 387 uncultured archaeon GZfos37B2
NP_070478   357 SAIsGIEAGGTMVRSDGVRVMLEpl--eeKEVN--DVYILQRIKEGL 399 Archaeoglobus fulgidus DSM 4304
NP_616180   383 AVIdAMECDGTFYRLDDVAVHFEpfmdssFEFTksNEDTLKQLFVKI 429 Methanosarcina acetivorans C2A

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