1JI1,1EH9,1Z0N,2WSK,1GOF,2E8Y,1FFQ,1CLC,1J0J,1M7X,1QBB


Conserved Protein Domain Family
E_set

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cd02688: E_set 
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Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
The E or "early" set domains of sugar utilizing enzymes are associated with different types of catalytic domains at either the N-terminal or C-terminal end. These domains may be related to the immunoglobulin and/or fibronectin type III superfamilies. Members of this family include alpha amylase, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase. A subset of these members were recently identified as members of the CBM48 (Carbohydrate Binding Module 48) family. Members of the CBM48 family include pullulanase, maltooligosyl trehalose synthase, starch branching enzyme, glycogen branching enzyme, glycogen debranching enzyme, isoamylase, and the beta subunit of AMP-activated protein kinase.
Statistics
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PSSM-Id: 199878
Aligned: 38 rows
Threshold Bit Score: 32.9011
Created: 26-May-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JI1_A         31 SVTLKLrtfkg-ditsaNIKYwdtad------------nafhWVPmvwdsndptgtfdywkGTIPasp-----siKYYRF 92   Thermoactinom...
1GOF_A        557 GGRITIstds----sisKASLirygtatht----vntdqrriPLTltnng------gnsysFQVPsdsgvalpgyWMLFV 622  Hypomyces ros...
1FFQ_A         38 DVSVSWnlwngdtgttaKVLLng-----------------keAWSgpstg-------ssgtANFKvnk----ggrYQMQV 89   Serratia marc...
1CLC_A         56 SKKATIaan------csTFYVvkedg------------tivyTGTatsmfdnd-tketvyiADFSsvne---egtYYLAV 113  Clostridium t...
1QBB_A        803 KLEANIalp------glGIEYstdgg------------kqwqRYDa--------------kAKPAvs------geVQVRS 844  Serratia marc...
YP_003998353  284 RVRFQIkapd---akkvQIDLgk-----------------myDLVkdad--------gnwsGNTEpls----gglHYYSL 331  Leadbetterell...
ZP_05055526   193 SVTFRIfapr---akwvKVGFfrdlka----------pedasWLLmkrgk------dfvweATVEedl-----tgCYYWY 248  Verrucomicrob...
YP_003548807  227 ETTFRLfapr---adgvSVCFgeaad-----------ssdfrCVEleced------gatwaLTVEqnl-----ngWYYNF 281  Coraliomargar...
CCB91967      889 ETTFRVyaph---algvKVRLydeqe------------nlfcEAPmkkns------kgeweTIFGqik-----qgQRYHY 942  Waddlia chond...
ZP_06422740    28 SVTFNLfapq---akavSVSGdflpkqdtqgtktenqitkhaPLQkneq--------gvwtYTTPpla----pelYAYAF 92   Prevotella sp...
1JI1_A         93 Qindgtstawyng--------ngpsstepnadDFYI 120  Thermoactinomyces vulgaris
1GOF_A        623 Mnsag-----------------------vpsvASTI 635  Hypomyces rosellus
1FFQ_A         90 Alcnadg--------------------ctasdATEI 105  Serratia marcescens
1CLC_A        114 Pgv---------------------------gkSVNF 122  Clostridium thermocellum
1QBB_A        845 Vspdgk----------------------rysrAEKV 858  Serratia marcescens
YP_003998353  332 Vidgvkvvdph-----------skafygmgryASGI 356  Leadbetterella byssophila DSM 17132
ZP_05055526   249 Rldgpddesslfdssf-kvldpyakavvghegPGIV 283  Verrucomicrobiae bacterium DG1235
YP_003548807  282 RvqgrtvdgtshfdgsfpvldpyakaclghrgPGIV 317  Coraliomargarita akajimensis DSM 45221
CCB91967      943 Vvdgkikidpysr-------sytsfsnkhqapYSIV 971  Waddlia chondrophila 2032/99
ZP_06422740    93 Dvdglritdpan----------vytsrdiatlSSIF 118  Prevotella sp. oral taxon 317 str. F0108
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