Conserved Protein Domain Family
Peptidase_C19B

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cd02658: Peptidase_C19B 
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.
Statistics
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PSSM-Id: 239123
Aligned: 21 rows
Threshold Bit Score: 271.889
Created: 22-Apr-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Active Site
Feature 1:Active Site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #    #                                                                       
EAA00302   327 GMKNLGNTCYLNSVMQVLFTipdfvrrfvdg--skaifdsfpsDPANDFNVQMAKLGTGLCSGrysvlsess-----ldt 399  Anopheles gambia...
P54201     320 GIENLGNSCYMSSVIQMIFAidsfqtrylkd--reasfkditqDPTQSFEIQMSKLAHGLLSGdysiplskpsknanees 397  Dictyostelium di...
AAG42755   309 GLVNLGNSCYLAATMQIVFSthsfisryfshqslkmafemapaDPTLDLNMQLTKLGHGLLSGkysmpatqkd----att 384  thale cress
EAL51065   281 GIRNSGNTCYAASGVQLIFGiskk----------------nwkGIEYHMTTQMAKLAQGFVSGkcseeed---------- 334  Entamoeba histol...
AAH79778   326 GIQNLGNSCYLNSTMQVIFSipafqrkyver--meqiyhkspaDPTQDFNTQVAKLGHGLLSGeyskpalekds-diape 402  African clawed frog
P45974     327 GIRNLGNSCYLNSVVQVLFSipdfqrkyvdk--lekifqnaptDPTQDFSTQVAKLGHGLLSGeyskpvpesgdgervpe 404  human
Q11119     301 GLKNLGNSCYLASTMQSLFSikefaiheln---lfntynsvcqTPTTDLQCQLGKLADGLVSGkfskpskigllnnpsss 377  fission yeast
XP_416513  501 GIRNLGNSCYLNSVMQVLFSipdfqrkyvdk--lekifqsapsDPTQDFSTQVAKLGHGLLSGeyskpasaege--qqpd 576  chicken
XP_325632  303 GLKNLGNSCYLASILQCLYDlpsfqqryys---dklgplpsvsDPAEDLETQLRKLGDGLLSGrysksdadvfa-sehtp 378  Neurospora crassa
XP_550320  312 GLVNLGNSCYMASVMQVMFSthpfisryfekqslkaafaiapaDPTLDLNMQMTKLAHGMLSGkysvpn----------- 380  Japanese rice
Feature 1                                                                                      
EAA00302   400 adsstgGIAPTMFKALIGQGHPDFSTKQQQDAQEFFLHIISTLEkhs------rhqTNPSEALRFCIEDRveccssgkvm 473  Anopheles gambia...
P54201     398 eaatqiGIAPKMFKSLIGASHAEFSTMKQQDAHEYLQYLLEYIEraehsrpswiqqANPTRLFQFHNEDRiecgssg--q 475  Dictyostelium di...
AAG42755   385 gdprqeGIPPRMFKNVIAASHAEFSSMRQQDALDFFLHLVGKVErasn----ttpdLDPSRSFKFGIEEKilcpsgk--- 457  thale cress
EAL51065   335 ntgsqvGMSIIGLKQGLDHYYQMYKTNEQQDSSEFVLHLIDRMEqe--------gfKEIQENLEVVIRNEikgegms--- 403  Entamoeba histol...
AAH79778   403 hkglqdGLAPRMFKALIGKGHPEFSTNRQQDAQEFFLHFINMVErnc------rssSNPNEVFRFLVEEKikclvsq--k 474  African clawed frog
P45974     405 qkevqdGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVErnc------rssENPNEVFRFLVEEKikclate--k 476  human
Q11119     378 ilpyqdGLRPFMFKDVVGQGHSEFGTSQQQDAYEFLLYLLGKIRkss------iakTDITKIFDFETEQKlsclsck--r 449  fission yeast
XP_416513  577 qkgvqnGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHFINMVErnc------rssENPNEVFRFLVEEKlkclate--k 648  chicken
XP_325632  379 nvpyqkGLQPSMFKHLMGRGHEEFSTMRQQDAFELLQHLIKLITrskhp---velgDPTQPMRFVMEQRLqclnckkv-r 454  Neurospora crassa
XP_550320  381 -qegqeGIHPRMFKTVIAAKHPEFSSMRQQDALDFFLHLIDQVDqant----gnheLNPFTGFKFFIEERlqcpsgk--- 452  Japanese rice
Feature 1                                                                                      
EAA00302   474 ynrrdeWCLPLQIPLQkatnldevkqyeaertaa---eregrrldpdalvrpkiTLAACLDTFAQPELveqfystaigak 550  Anopheles gambia...
P54201     476 vkytrrLENILSVPVNlddatnkqevaqyeetlk---qqngvrqkdqeeirpiiPLVSCINGFVEPYRvedflspatgvk 552  Dictyostelium di...
AAG42755   458 vgynkrEDCILSLNIPlheatnkdeleafhkqkagkgleendmrssdeivrprvPLEACLANFASSEPiedyyssalkgm 537  thale cress
EAL51065   404 vnttreKIIEMGLDVPymvlie--------------------------rkhidlHMEDIIKMYGSVTPiegyqk--ngry 455  Entamoeba histol...
AAH79778   475 vkytqrVEYMLQLPVPmeaalnkeelsayeqcrl---qaerehrpppelvrariPFTSCLEAFAAPEQldefwsaalqak 551  African clawed frog
P45974     477 vkytqrVDYIMQLPVPmdaalnkeelleyeekkr---qaeeekmalpelvraqvPFSSCLEAYGAPEQvddfwstalqak 553  human
Q11119     450 vryssfSSQGLTLTVPrvkigeie----------------------geqiyeevSIDQCLDATIQPDQmeytcea-cksk 506  fission yeast
XP_416513  649 vkytqrVDYIMQLPVPmdaalnkdelleyeekkr---qaeeekqplpelvrakvPFSSCLEAYGAPEQvddfwstalqak 725  chicken
XP_325632  455 yssneqDSVFIDVPMEklppeeeg----------------------qepkykpvTLKQCLDSLTASEVveltcag-cgsk 511  Neurospora crassa
XP_550320  453 vsynkrSDYILSLNIPlheatnkeqleafhekkaa-mdldgkevsneeivrprvPLEACLASFSGAEEvpefystalnsk 531  Japanese rice
Feature 1                                                                                      
EAA00302   551 ttAKKTTKLASMPDYLLLHLKKFtlkedWTSLKLDVAIDIPEVLdletlrgtgkqpyeeelpdiagreptpppmdpevme 630  Anopheles gambia...
P54201     553 tfSLNSSRMATFPEVLIIHLKKYtynadYTPKKLNVFMDVPDIIdidslrgrgikegevplkegtintttkvpepsfnqe 632  Dictyostelium di...
AAG42755   538 ttAIKTTGLTSFPDYLVLHMRKFvmeegWVPKKLDVYIDVPDVIdishmrskglqpgeellpdavpeevmesaqpvanee 617  thale cress
EAL51065   456 inATKRIRIGKFPKYLLIKLERQialsyEDVRKVDADVFGMERIdlsmlksnnkeeekeekveinqeklevlssmgfdei 535  Entamoeba histol...
AAH79778   552 snALKTSRFASFPDYLVIQIKKFtfgldWVPKKLDVSIDVPDELdlsdfrggglqggeeelpdvapplvtpdepkgslgf 631  African clawed frog
P45974     554 svAVKTTRFASFPDYLVIQIKKFtfgldWVPKKLDVSIEMPEELdisqlrgtglqpgeeelpdiapplvtpdepkgslgf 633  human
Q11119     507 lgATTTTAMKSFPKVLILQANRFdl-qgYQVKKLSIPIIVNEDGiynfdrlmakdhpndedylpektetiewnqsaieql 585  fission yeast
XP_416513  726 svALKTTRFASFPDYLVIQIKKFtfgldWVPKKLDVSIEMPEELdisalqgtglqdgeeempdiapplvtpdepkgslgf 805  chicken
XP_325632  512 dgFTKRQAFKTFPDVLVVNARKMav-vnWVPVKIDVPVIVDDEPlnldeylskgqqpdeealpedesakssapafvpnae 590  Neurospora crassa
XP_550320  532 ttAIKTAGFKTFPDYLVLQMRKFvmeagWVPKKLDVYVDVPDIIdishmrskgiqpgeellpegasgdnkaepvhpvase 611  Japanese rice
Feature 1                                                                                      
EAA00302   631 qllgmgfppeackraifftkntgiepatqwmmehiadadfas-------------------------------------- 672  Anopheles gambia...
P54201     633 vldtllsmdfplvrckkallatggkdaelamnwifehtedpdidieqtpvinnn--------------------nnnnss 692  Dictyostelium di...
AAG42755   618 ivaqlvsmgfsqlhcqkaaintsnagveeamnwllshmddpd-------------------------------------- 659  thale cress
EAL51065   536 qaktalritnndieeaimkltsgeikeiedt------------------------------------------------- 566  Entamoeba histol...
AAH79778   632 yglddddsycsphfssptspvldesvvtqliemgfpaeacrkavyytgnsgaeaamtwvmshm-ddpdfalpmsgasapl 710  African clawed frog
P45974     634 ygnededsfcsphfssptspmldesviiqlvemgfpmdacrkavyytgnsgaeaamnwvmshmddpdfanplilpgssgp 713  human
Q11119     586 qamgfplvrcqrallatgnsdtetamnwlfehmedpeidkpiev------------------------------------ 629  fission yeast
XP_416513  806 ygnedddsfcsphfssptspmldesviiqlvemgfpmdacrkavyytgnsgveaamnwvmshmddpdfanplvlpgssgp 885  chicken
XP_325632  591 alamleamgfprvrgekalhatgnsdanaamewlfahmddpdidvpld-------------------------------- 638  Neurospora crassa
XP_550320  612 divsqlasmgfnylhcqkaaistsntgveeamnwllshmddpdi------------------------------------ 655  Japanese rice
Feature 1                                                                                      
EAA00302   673 -----psaagaafvpnpvglemlmgmgfsdrqatkalketgnnteravdwifshtdeldsmaiddatsdsvataaaaags 747  Anopheles gambia...
P54201     693 nsndklfvfnsqdvdniigmgftdsqaklalkntkgnleraadwlfshidnldelvakdnastssinpslipqsttslqp 772  Dictyostelium di...
AAG42755   660 ------idapishqtsdidqssvdtllsfgfaedvarkalkasggdiekatdwvfnnpnasvsdmdvsssnsaqtpaqsg 733  thale cress
EAL51065   567 ----------------itdkyregivmmkdmgfdeessrkalektkgdieqaiifaatcneekenkmeeekenkmeeegn 630  Entamoeba histol...
AAH79778   711 sastggdppseehvatiismgfsqeqavkalratnnnleravdwifshiddldaeasmdlsegrsaaesvseslppagpr 790  African clawed frog
P45974     714 gstsaaadpppedcvttivsmgfsrdqalkalratnnsleravdwifshiddldaeaamdisegrsaadsisesvpvgpk 793  human
Q11119     630 ----sellpkadssvseenvqslcefgftvaqarkgllesnnnieravdwilnhpdesfeepplegsdssiknenmgswe 705  fission yeast
XP_416513  886 gstiacpdppsedsvativsmgfsrdqamkalratnnsleravdwifshiddldaeaamdisegrsaaesisesvpvgpk 965  chicken
XP_325632  639 lsassggaasggagaadpeklamlesmglsgpravkalnetggdveraiewlfshpdddgadaveeeapagnegpkkeag 718  Neurospora crassa
XP_550320  656 ----ndpiskdsqaaeqtvdetsvqtlvsfgfqedvarkalaasggnieratdwifshpeafssvptdsstsnmedddah 731  Japanese rice
Feature 1                              #                    #                      
EAA00302   748 dggAAGKYKLVAFISHMGTSAQVGHYVCHILkd-----gqWVIFNDNKVAISQNpp--keLGYLYLYQ 808  Anopheles gambiae str. PEST
P54201     773 vsdGVGKYELLGFISHLGNNVTCGHYVCHIKkn-----nrWIKFNDRHVQLSEQpp--keLGYIYFYK 833  Dictyostelium discoideum
AAG42755   734 lpdGGGKYKLFGIVSHMGTSVHCGHYVAHILke-----grWVIFNDDKVGISTDpp--kdMGYVYFFQ 794  thale cress
EAL51065   631 dddRSGKYELIGFVSHIGANVNCGHYVCHMKqg-----deWIMFNDNKVYQSQNpp--ftRGYLYLYK 691  Entamoeba histolytica HM-1:IMSS
AAH79778   791 vrdGAGRYELFAFISHMGTSTMCGHYVCHIKke-----grWVIYNDQKVCASEKpp--kdLGYIYFYQ 851  African clawed frog
P45974     794 vrdGPGKYQLFAFISHMGTSTMCGHYVCHIKke-----grWVIYNDQKVCASEKpp--kdLGYIYFYQ 854  human
Q11119     706 stnVPVNYNLKAIISHKGSSAHAGHYVAFIRkeid-gkqqWVLFNDEKVLQVASleeaktTGYVYLFE 772  fission yeast
XP_416513  966 vrnGPGKYQLFAFISHMGTSTMCGHYVCHIKkd-----grWVIYNDQKVCASEKpp--kdLGYIYFYQ 1026 chicken
XP_325632  719 sseLPAKFQLQSIVCHKGTSIHAGHYVAFIRkklsedetsWVLFNDEKVVKVVDveemkkTAYVYFFK 786  Neurospora crassa
XP_550320  732 ipdGSGRYKLMAFVSHMGTSTHCGHYVAHVLkd-----grWVIFNDSKVAASVDlp--kdMGYLYFFQ 792  Japanese rice

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