Conserved Protein Domain Family
Peptidase_C39_likeA

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cd02417: Peptidase_C39_likeA 
A sub-family of peptidase C39 which contains Cyclolysin and Hemolysin processing peptidases. Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage is mediated by the transporter as part of the secretion process. Bacteriocins are antibiotic proteins secreted by some species of bacteria that inhibit the growth of other bacterial species. The bacteriocin is synthesized as a precursor with an N-terminal leader peptide, and processing involves removal of the leader peptide by cleavage at a Gly-Gly bond, followed by translocation of the mature bacteriocin across the cytoplasmic membrane. Most endopeptidases of family C39 are N-terminal domains in larger proteins (ABC transporters) that serve both functions. The proposed protease active site is not conserved in this sub-family.
Statistics
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PSSM-Id: 239098
Aligned: 19 rows
Threshold Bit Score: 118.886
Created: 24-Mar-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAP74653     22 IDYAQQPALSALVILAKYYGISASPADIMHQFsdntkGDLNEIEWMLAAKKLELKVKIIKQpl-trLSMITLPALVwcdn 100 Moraxella bovis
ZP_00205348  13 NAPRLDTGLASLVMLARFHQVAASPEQLAHEFgs-pdQYLSQDSLLLAARKLGLKAKAARTtt-erLDRTPLPAIAa--- 87  Pseudomonas syri...
AAG25076     25 EATIADSGVAAICAVAGYFRIASRPETLSRELal--tAPAARDDLLRAAKIVGLKARTVRAekisrLATLPAPALAs--- 99  Rhizobium legumi...
ZP_00287974   5 LSQKPDSGLLCVMLLARFHQIPSSRDGLRHEHgq-pgESFGHLEVLKALKALGLKAKAVKSak-krLNKLPLPAIIp--- 79  Magnetococcus sp...
AAM37055     11 QGGPGLQALQSLCLIARLHQVAADPAALAHQLglspsEPVDVPDLLRAAKSLGLKARKVSCgv-erLALTPLPALAllre 89  Xanthomonas axon...
NP_747030    25 NANTIESGLVCLITLARYHGVAVSAEQLQHDHaa-agERFSTGPLLRAFQQLGLKAKHRSVdp-arLQQTPLPAIAv--- 99  Pseudomonas puti...
NP_772933   129 PADGDESGLIAMAILLRCHGIAADPEQIRHRMg---tSRVGVTEILRCSREFGLKARAQRSsw-nrLAVTPLPAIAa--- 201 Bradyrhizobium j...
CAE12929      8 SSPGLDTGLICLAMLARFHNIAISTEQLSHEFst-asQGFTLKELLLAARHSGLKARAVHTtl-arLEHTPLPAIAi--- 82  Photorhabdus lum...
YP_070688    11 EGTKVIQPLEALAYAATCFDLTIEASQLAHQLgl-apDEIDSIALCRCAAWIGLRARKVNQsf-erVGKLVLPVLF---- 84  Yersinia pseudot...
AAC44070     23 EGELRESGLVALSLLLGVHNIAVTPEQLRHMLgh-aeGASVDDLILLAKRQQGVRAKAVDVpr-ggLARQPLPAIA---- 96  Sphingomonas sp....
AAP74653    101 k--------------pdldQNLNSHFILTKIdgvgsAAKYLIYDLi----ENRPIILDASEFSERYSGKLMLV 155 Moraxella bovis
ZP_00205348  88 -------------------DNNGGFFIIARLd----QGKALIHDPf----SQRPEVVTFEALQERWTGQLLLI 133 Pseudomonas syringae pv...
AAG25076    100 -------------------LKDGTFAVFAGLa---aEGRYRLINPi----DFSARNVEADELLALTSGEFILV 146 Rhizobium leguminosarum...
ZP_00287974  80 ------------------sAKEGGFQILAKAe----GGKVLLHDPt----EAKPEVMDTEVFLEQWDGSVILA 126 Magnetococcus sp. MC-1
AAM37055     90 smrepdrepgvagegndapRHGVRTAVLAQCd----GQRVLLQEPgesasAGRPVIEPVEEFAKRWTGDLILV 158 Xanthomonas axonopodis ...
NP_747030   100 -------------------DTRGEYFIIARVe----GEQVLVQDPh----SRAPQALTLAELLVRWSGELILV 145 Pseudomonas putida KT2440
NP_772933   202 -------------------LRDGGFLILGKVv----DDKLLAQRPl----SPRPESLTQAELEAIWDGDIILM 247 Bradyrhizobium japonicu...
CAE12929     83 -------------------DRDGQFFILAKLd----KEQALIQDPr----SARPEVISFEQLEQRWTGQLVLV 128 Photorhabdus luminescen...
YP_070688    85 -------------------SDGAQWYVLLSLt----AQEATVYFAg----SDQTRKISPEVLAKLWRNEVILL 130 Yersinia pseudotubercul...
AAC44070     97 -------------------DGPEGWFVIGGLt----EHGVIIQRP-----GHAPEQVDREGLDALWSGTLVLL 141 Sphingomonas sp. S88
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