4B45,4B46,3ZID


Conserved Protein Domain Family
CetZ_tubulin-like

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cd02202: CetZ_tubulin-like 
Click on image for an interactive view with Cn3D
Cell-structure-related euryarchaeota tubulin/FtsZ homologs
CetZ proteins comprise a distinct tubulin/FtsZ family. The crystal structures of CetZ contain the FtsZ/tubulin superfamily fold and its family members have mosaic of tubulin-like and FtsZ-like amino acid residues. However, a recent study found that CetZ proteins (formerly annotated FtsZ type 2) are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.
Statistics
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PSSM-Id: 276962
Aligned: 35 rows
Threshold Bit Score: 299.156
Created: 9-Feb-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
nucleotide
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:nucleotide binding site [chemical binding site]
Evidence:
  • Structure:4B45; Haloferax volcanii CetZ protein binds GDP, define by using 4.0 A contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                ###  #                                                                  
4B45_A         1 MKTVLIGVGQAGGKLASALQSFDrqtg----fgavLDAVAVNTAKADLQSLpv------eTVLIGqdrv-------nghg 63  Haloferax volcanii
ERG89240       1 MQVGAIGIGQAGGKILDTFLAYNqeia----espiRSALAVNTAETDLLGLthig--ddqKLLIGedtq-------nggg 67  halophilic arch...
ERG89963       1 MKIGLIGFGQAGGKIADTIIKDAkewp----stciTSHFAINTAESDLEGLnnip--eerQILLDekidsdngnisggng 74  halophilic arch...
YP_181331      1 MKLIVIGLGQCGSRIADEFARMDkrarsqrnvsicPGVFAVNTDQADLSGLvtikpdhqhRILIGgrkt-------gghg 73  Dehalococcoides...
ABD41963       1 MRLLILGLGTAGSKIADAIIRPSghsa----rcsdLHAIAVDNDPEILEHLthig--eeaKFYFPkd------------d 62  Methanospirillu...
ADJ25918       1 MKLMVVGCGQCGGRIADQFAKLNrvahvrrgvdiaTNVLAVNSDVADLSGLehirsdyqhRVLIGaqkt-------sghg 73  Dehalogenimonas...
NP_143219      1 MRAIIIGIGQCGTKIADIFSLVD------------FEALAINTSKSDLEYLkhip--perRILVGesiv-------ggkg 59  Pyrococcus hori...
YP_001029514   1 MRALLIGVGGAGCRIVETLSRHDaksg-----vksVRSYVFDADRDLISRLsgip--aanRMVLTp-------------- 59  Methanocorpuscu...
AII61094       1 MKLMVIGCGQCGGRIADQFALLGknakrqrgisivSNVLAINTDIADLSGLvhvkpdykhRILIGsrkt-------aghg 73  Dehalococcoides...
ADJ26132       1 MKLVVVGLGQAGGRIADEFARIAikvrqdrglrivTDILAVNTDSADLSSLvkvkkdiqhRILIGtgqt-------hghg 73  Dehalogenimonas...
Feature 1        ###                                       ####                        # #   #   
4B45_A        64 VGGDNELGAAVMEsDQTEVMSALDgrv-taeAESIFVVAGLGGGSGSGGAPVLAKALAGVYd-vPVYVLGILPGADEGa- 140 Haloferax volcanii
ERG89240      68 VGADNKTGAQVTSqSIERIHEGLEqmp-rheLDGFLILTSLGGGTGSGGTPVVTRHINSMYdslPVYVVGVLPSKREGq- 145 halophilic arch...
ERG89963      75 VGADNHLGAIVCKeQIGTIDSGLTtvn-kqqTDAFVIVTALGGGTGSGGTPVLAQHINYTYpdmPVYVIGVTPTQSEGn- 152 halophilic arch...
YP_181331     74 VGKINELGAEIARaDADKVIDALRttkrfydADGFLVIAGAAGGTGSGSVSIIAQHIKERYmdkPVYALIALPFEHEEkt 153 Dehalococcoides...
ABD41963      63 IEAPELLTTRFTIdEVKSKLKGFDvg----tHDAVLVCAGLGGGLVSLVPHLVSIIRETMFe--PVFALVTIPTEDEGe- 135 Methanospirillu...
ADJ25918      74 VGKINEMGAEIARdDGDKLIQAIKnspnfgeTDAFLLIAGAAGGTGSGSISVLSQQIKERFpekPVYNMLVLPFAYEEat 153 Dehalogenimonas...
NP_143219     60 VNANPLLGREAMKrDLPMVMKKISslvgyedVDIFFLTFGFGGGTGAGGTPVLAEALKEEYpdsLVVAIGALPLKEEGi- 138 Pyrococcus hori...
YP_001029514  60 SDPVKSVNDKGTDfDTGHLASCFQdag-vdeIDAIFVCAGLGGRMAELVPEFVKQVSAAFPd--PVFTILTLPGRNEGi- 135 Methanocorpuscu...
AII61094      74 VGKLNELGAQLAReDGDKILDSIRetrllqdTDAFLLVAGASGGTGSGAIAVLTKMIKERFvdkPVYNMIVLPFNYEEvt 153 Dehalococcoides...
ADJ26132      74 VAKISEMGAEIAKsEKDNVIGIVKknerfyeADAILLIASGGGGTGSGTLPVMAQAFRDSFrdkPVYAMVALPYDHERqt 153 Dehalogenimonas...
Feature 1                                                                              #         
4B45_A       141 --lYQVNAGRSLKTVAR--------------------------------------------EADAVLLVDNDAFRSAGES 174 Haloferax volcanii
ERG89240     146 --lYAYNAARSLQTLLQtgatvddddqptsgpdgatqtgaetaiigpdesindareaqtepLADGIILVDNDAYSRPDES 223 halophilic arch...
ERG89963     153 --vYVENTLESMKTVQQ--------------------------------------------YVNGLFLVGNDSFRYSDEP 186 halophilic arch...
YP_181331    154 eerTVYNTAVCLKSISS--------------------------------------------VADAVILVENQRYVRKDFS 189 Dehalococcoides...
ABD41963     136 --sRLFRAMKNLQMIRP--------------------------------------------LVDGVIIFDNQLWLDKARG 169 Methanospirillu...
ADJ25918     154 eerSVFNVGICLKSCYL--------------------------------------------VADAIFLVDNQRFIKASHS 189 Dehalogenimonas...
NP_143219    139 --rPTINAAITIDKLSR--------------------------------------------IVDSIIAIDNNKLKESDED 172 Pyrococcus hori...
YP_001029514 136 --kVSAHASETLEAIRE--------------------------------------------ITSASLLFDNETWYTRITE 169 Methanocorpuscu...
AII61094     154 eerTIYNVGTCLKSAYG--------------------------------------------VADAVILADNQRYVRDSSS 189 Dehalococcoides...
ADJ26132     154 eerAVFNTAMCLKSTRD--------------------------------------------VTDAIILVDNQRFIRKSQS 189 Dehalogenimonas...
Feature 1                                       #  ##                                            
4B45_A       175 ms---------------------------eGYDAINEAIARRVGLLLAAGEat----egVGESVVDTSEVINTLRSg-GI 222 Haloferax volcanii
ERG89240     224 le---------------------------qAWEYINRTIAQAVTDLLAAGEpan--kadVPENVVDTADIEQTLTNg-RL 273 halophilic arch...
ERG89963     187 is---------------------------dLYERVNRTIAQRLLTLLAAGEvssdgpaaHPESVLDTAEIVNSVSKd-GF 238 halophilic arch...
YP_181331    190 lr---------------------------yNLSKINSLIVEPFWDLLCAGEekn--skyIGAKTMDAGDIIQTISGw-TV 239 Dehalococcoides...
ABD41963     170 elaettleqrpvgiaekfwipgtsekrgiePYDLVNRHIARRIRLLVHAGEiq----kgVPQTVLDSREILNTITGm-SY 244 Methanospirillu...
ADJ25918     190 lr---------------------------aNLDKINYHMVKPFYNLLCAGEekn--pkyIGSKVMDGGDIIQTLSGw-TV 239 Dehalogenimonas...
NP_143219    173 is---------------------------qAYEKINYAIVERIASLLALIDv-------PGEQTLDASDLKFVLRAmgSF 218 Pyrococcus hori...
YP_001029514 170 dvslaaekdg-----------vitkpkieeLYARLNEDLAARIGLLLRAGEfglk-gveSAEVVLDAGEILNTLTGm-DL 236 Methanocorpuscu...
AII61094     190 is---------------------------dNFSKINYRFVEPFYNILSAGEett--pryIGSKVLDAGDIIQTLSGw-TV 239 Dehalococcoides...
ADJ26132     190 la---------------------------sNFQKINELIVAPFYNLLAAGEekn--pkfIGTSVLDTGDIKETLNGw-TG 239 Dehalogenimonas...
Feature 1                                                                                        
4B45_A       223 AALGYASaeaspna---------------------------edninaVMSTTRRAVLTGTSLPDAs-DADAALVVIAGEP 274 Haloferax volcanii
ERG89240     274 ATIGYATtdletdttqtlldrlrrt----sstdienhnfdqqeaelrIMNLVREATQTTLGFDTTleSTEAGLVLVAGPA 349 halophilic arch...
ERG89963     239 TTLCHAQetqsnteksvlgtlfsrstsndnendhvvdyldtadsdntLLSLTKEAVNNNNSFEADisTADSALMLVTGDS 318 halophilic arch...
YP_181331    240 IGHGKARvrtltlpfdkt------------------dhfrmksvsnyKGIRAMDEAVSELSLKIDprDAGRALFLISAPA 301 Dehalococcoides...
ABD41963     245 ITIGLAEeelpehgrisilrq------------rsetrvgrqeraarIVKLAEKAVFRDISSYCDfsTAKKALILLSGPE 312 Methanospirillu...
ADJ25918     240 IGFGQTKtpnlkfrrna--------------------dfrdqsnevrKGAEAINAALADLSLRCNptDAKRGLYLLTASQ 299 Dehalogenimonas...
NP_143219    219 ATVGYAKadatk-------------------------------ikslSRLIIRSFENEGLYLDVNleSALYGLVAIHGPP 267 Pyrococcus hori...
YP_001029514 237 VAIGYAVeklptawssfmkrlr----------veeyllteghlrtsrIVELAKKAVYEEISVPCDltSADKALILISGPS 306 Methanocorpuscu...
AII61094     240 IGHSKIAnsflpfkld----------------------frgkhaetqKGAQAMEDAISELSLKCRpeDARRALYLLSAHP 297 Dehalococcoides...
ADJ26132     240 IGYGTVDvdiipkfrget-------------------nylrknlesqRGLYALDEALAEMSVSLNpvDAGRAALLVSGPA 300 Dehalogenimonas...
Feature 1                                                                     
4B45_A       275 DTIPRKGVERARRWVEDEtgsMQVRGGDFPLESg---rLASLVLLGGverSERVESFMERA 332 Haloferax volcanii
ERG89240     350 EALNHRGIQRSRDWLQDQiqtPAVRGGDYPRDQp---eVQTALLLSGvhdSDRLRELYAQA 407 halophilic archaeon J07HX5
ERG89963     319 DRFSQDELEASVSWLENKtnnAQVRTGDRPADId---kVSVLVLISGlnkSSKLSQFMQSI 376 halophilic archaeon J07HX5
YP_181331    302 KEINMDIIKEQGDWLREMapnAIIRNGDYPREKd---tMTVTVIFSElsdLERVRYYYNRS 359 Dehalococcoides ethenogenes 195
ABD41963     313 EELSMKGYMAVRKWIDESidgFEMRAGDIPVSSrqsnrVSVLIVFSGlktVTRVQELYERF 373 Methanospirillum hungatei JF-1
ADJ25918     300 SDMSMDLINEMSGALKGMateATIRTGDYPRGDk---tLDVTVVLSElvnSSRVMDYFSKT 357 Dehalogenimonas lykanthroporepelle...
NP_143219    268 EVLKAKEIFDALSELSQRirgKQIFRGFYPDPRer--eVEVVTLLSGiyeSKSIENIVITA 326 Pyrococcus horikoshii OT3
YP_001029514 307 KELSMKGFQTVRKWIDRSirgLEMRAGDYPVKStk--yVGVIIVLAGiqnVPRVAELDEIR 365 Methanocorpusculum labreanum Z
AII61094     298 NKMSIDIIKELSSTLRDNakhAIIRSGDYPRGDn----MGVTVIMSEissPKKVMDYFDRT 354 Dehalococcoides mccartyi CG5
ADJ26132     301 KELSVDMVGDLSARLREVapsAQQRLGDYPRERg---iIDVSVILSElsdIAILRRFFEDS 358 Dehalogenimonas lykanthroporepelle...

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