1DE4,1SUV,1SUV,1DE4


Conserved Protein Domain Family
PA_TfR

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cd02128: PA_TfR 
Click on image for an interactive view with Cn3D
PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR). This group contains various PA domain-containing proteins similar to human TfR1 and TfR2. TfR1 and TfR2 are type II membrane proteins, belonging to the peptidase M28 family. TfR1 is homodimeric, widely expressed, and a key player in the uptake of iron-loaded transferrin (Tf) into cells. The TfR1 homodimer binds two molecules of Tf and this complex is internalized. In addition to its role in iron uptake, TfR1 may participate in cell growth and proliferation. TfR2 also binds Tf but with a significantly lower affinity than does TfR1. TfR2 is expressed chiefly in hepatocytes, hematopoietic cells, and duodenal crypt cells; its expression overlaps with that of hereditary hemochromatosis protein (HFE). TfR2 is involved in iron homeostasis. HFE and TfR2 interact in cells. By one model for serum iron sensing, at low or basal iron concentrations, HFE and TFR1 form a complex at the plasma membrane; at increased Tf, Tf competes with HFE for binding of TfR1, resulting in HFE disassociating from TfR1 and associating with TfR2 . The TfR1-TfR2 association might initiate a signal cascade leading to the induction of hepcidin (a small peptide hormone that controls systemic iron levels). Human mutations in TfR2 are associated with a form of hemochromatosis (HFE3). The significance of the PA domain to TfRs has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Statistics
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PSSM-Id: 239043
Aligned: 12 rows
Threshold Bit Score: 265.032
Created: 18-Jan-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:PA/protease-like domain interface [polypeptide binding site]
Evidence:
  • Structure:1SUV_A, human transferrin receptor TfR1 in complex with transferrin, contacts of PA domain with protease-like domain at 3.5A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
1DE4_C        79 SVIIvdkn-grlvYLVenPGGYVAYSkAATVTGKLVHANFGtkKDFEDLy---tPVNGSIVIVRAGki-tFAEKVANAES 153 human
1SUV_B        78 SVIIvdkn-grlvYLVenPGGYVAYSkAATVTGKLVHANFGtkKDFEDLy---tPVNGSIVIVRAGki-tFAEKVANAES 152 human
1SUV_A        78 SVIIvdkn-grlvYLVenPGGYVAYSkAATVTGKLVHANFGtkKDFEDLy---tPVNGSIVIVRAGki-tFAEKVANAES 152 human
1DE4_F        79 SVIIvdkn-grlvYLVenPGGYVAYSkAATVTGKLVHANFGtkKDFEDLy---tPVNGSIVIVRAGki-tFAEKVANAES 153 human
Q90997       210 SISIng-----keEILetPDAIVAYSeSGSVSGKPVYVNYGlkKDFEIIqkvvaSLNGTIVIVRAGki-tLAEKVANAKE 283 chicken
CAF92677      64 YCPYgaag--taqVRQpvAMPTAAASrALCLQGGVVYANYGrqQDFHWLqssgvSVGGAVVVIRVGggvsFAEKVWLAEK 141 Tetraodon nigro...
Q9UP52       211 LHWVdeagkvgeqLPLedPDVYCPYSaIGNVTGELVYAHYGrpEDLQDLrargvDPVGRLLLVRVGvi-sFAQKVTNAQD 289 human
CAF97624     189 SIVFk-------dGNEerPSGFLSYSaCGRVMGAVLYGHYGqeSDLMMLqnknlDLSGRVLLLRAGrn-sFAEKVANAAK 260 Tetraodon nigro...
AAV66589     209 KVWFg-------nEEIgsPKGFLAYSeTGRREGRVVYANYGepADLQAVqanevSLNGTVVLMRAGri-sMAQKVMNVAK 280 zebrafish
AAV66590     198 LWLVdseg-aeleEIRldSEGYCAYSaTGTATGGLVYVNYGrrEDFDQLrvmgvSLNGSIAMVRVGggvsFAEKVWLAQE 276 zebrafish
NP_001009917 198 RVLFr-------nNVVgtTEGYLAYSaIKTVQGAALYAHYGraEDFRRLqevsaDVSEKVVLVRAGll-sYAEKVANAAS 269 zebrafish
XP_001364120 208 NVVTiln---esnDLMe-MNGYVAYSvNSTANGTLIYANYGskNDFEQLksqqvTIDGSMVLVRAGkl-sFAEKVENAEA 282 gray short-tail...
Feature 1                     #             #### #   ####  # ###                                 
1DE4_C       154 LNAIGVLIYMDqTKFPivn------aeLSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFG 227 human
1SUV_B       153 LNAIGVLIYMDqTKFPivn------aeLSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFG 226 human
1SUV_A       153 LNAIGVLIYMDqTKFPivn------aeLSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFG 226 human
1DE4_F       154 LNAIGVLIYMDqTKFPivn------aeLSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFG 227 human
Q90997       284 AGAAGVLMYVDsLMYGit-------dtLIPFGHAHLGTGDPYTPGFPSFNHTQFPPVESSGLPHIAVQTISSSAAARLFS 356 chicken
CAF92677     142 SGAGGVLIYPDpADLPqdprrlglsshTAVSEHVHLGSGDPFTPGFPSFNHSLVPPLQSSGLPLIPALPVSAAVAAKLLS 221 Tetraodon nigro...
Q9UP52       290 FGAQGVLIYPEpADFSqdppkpslssqQAVYGHVHLGTGDPYTPGFPSFNQTQFPPVASSGLPSIPAQPISADIASRLLR 369 human
CAF97624     261 LNASAVLIYPDpADYAlq-------dtTELFGHVHLGSGDPYTPGFPSFNHTQFPPVVSSGLPKIPAQTITAGMASKILR 333 Tetraodon nigro...
AAV66589     281 LGAVAALIYPDpADYDgm--------dTELYGHVHLGSGDPYTPGFPSFNHTQFAPAKSSGLPEILAQTIPASMARKILS 352 zebrafish
AAV66590     277 AGHVGVLIYPDpADVPqdprrlglhsnAVISEHVHLGSGDPFTPGFPSFNHTQFPSTQSSGLPIIPAQPISANVAAKLLS 356 zebrafish
NP_001009917 270 LNASAVLIYPDpVNYQik-------enTALFGHVHLGTGDPYTPGFPSFNHTQFPPAQSSGLPSIPAQTITTKQASEIMS 342 zebrafish
XP_001364120 283 YNAVGVLIYLArGDFDiid------adIVPFGHAHLGTGDPFTPGFPSFNHTQFPPSQSSGLPTIPVQTISRSQALKLFS 356 gray short-tail...
Feature 1                                               
1DE4_C       228 NMEGd-CPSDWkt----dsTCRMvts----eskNVKLTV 257 human
1SUV_B       227 NMEGd-CPSDWkt----dsTCRMvts----eskNVKLTV 256 human
1SUV_A       227 NMEGd-CPSDWkt----dsTCRMvts----eskNVKLTV 256 human
1DE4_F       228 NMEGd-CPSDWkt----dsTCRMvts----eskNVKLTV 257 human
Q90997       357 KMDGdtCSEGWkga---ihSCKVttkq--esqiMVKLDV 390 chicken
CAF92677     222 QLTGpsCPPLWrpql-pyvRCLVgpdl--ssgrRVRMSV 257 Tetraodon nigroviridis
Q9UP52       370 KLKGpvAPQEWqgsl-lgsPYHLgp------gpRLRLVV 401 human
CAF97624     334 QLGGpvVPAGWt------gALRLgde-----kdIITMEV 361 Tetraodon nigroviridis
AAV66589     353 KMGGseVPSKFkgg---ftSYKFgde-----snKVALSI 383 zebrafish
AAV66590     357 QLSGavCPRGWqgrl-pyvQCVLgpgfsgvgvrQLKMAV 394 zebrafish
NP_001009917 343 KLGGrsSPREWsdgmladtQYLLgdk-----ddIITVEV 376 zebrafish
XP_001364120 357 KMNGadCPQGWdg----dsKCKIss------evNVRLTV 385 gray short-tailed opossum

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