Conserved Protein Domain Family
PA_C_RZF_like

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cd02123: PA_C_RZF_like 
PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like. This group includes various PA domain-containing proteins similar to C-RZF (chicken embryo RING zinc finger) protein. These proteins contain a C3H2C3 RING finger. C-RZF is expressed in embryo cells and is restricted mainly to brain and heart, it is localized to both the nucleus and endosomes. Additional C3H2C3 RING finger proteins belonging to this group, include Arabidopsis ReMembR-H2 protein and mouse sperizin. ReMembR-H2 is likely to be an integral membrane protein, and to traffic through the endosomal pathway. Sperizin is expressed in haploid germ cells and localized in the cytoplasm, it may participate in spermatogenesis. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate.
Statistics
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PSSM-Id: 239038
Aligned: 31 rows
Threshold Bit Score: 120.137
Created: 14-Jan-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
PA/protease or
Feature 1:PA/protease or protease-like domain interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
Q90972        23 LFAFLnllpv--eadiLAYnfen---gtqtFDDLPARFGYRLp-AEGLKGFLINSKPENACEPIappp---------lrd 87  chicken
CAK95090      16 FKILSp---------sTLAseei----lkeIQFNIANFGYVPy-GQKISAELELAQPYNFCELQeerig-------nynn 74  Paramecium tetr...
CAK61079       8 VCIVAfvqgklkvirpAELvdrl----gskIDMALANFGEIPf-GHRLVGYVDMASPTDACSPLe--------------- 67  Paramecium tetr...
CAK63118       7 LFASSvekltliqpesLIDklg------seIKYGIAHFGDIPw-GQRMIGTLIPTYPIDGCGSIlp-------------- 65  Paramecium tetr...
CAK59399      57 VCIIAlvdc----emkVLRpadlvdrlgskIQIALPNFGVIPf-GHRLMGYVDMAEPQDGCSALq--------------- 116 Paramecium tetr...
CAK87836      18 LKVIGpeel----kqeFAKnn-------aeIVFSIANFGNVPw-GRRLSGTLDMSDPFEACTDIn--------------- 70  Paramecium tetr...
CAK65401      16 TLVIK-----------YPQdlaqr-peldkIKFNIANFGFVPy-GQRIAGVLEVAQPFNFCQPNfntts-------tyns 75  Paramecium tetr...
XP_001027786  22 LSIISp----------QALadql----gdeIGYSLANYGNNPy-GSTFYGVIAIPDPLNGCQSIsskydlnlenteesql 86  Tetrahymena the...
AAX25997      35 VFAVV-----------LVKdlstg-ktvseFEDSEALFGNVItqGSLLLGRIHASQPINGCVDRiplpk--------nas 94  Schistosoma jap...
CAK69088       8 ICIITviqs----klkVIRpqnl---ineyIDYSIANFGIIPf-GHRLMGIVDVAYPQNGCSDLr--------------- 64  Paramecium tetr...
Feature 1                                                      ###                               
Q90972        88 nSSTAFIVLIRRLeCNFDIKVLNAQRAGYKAAIVHNVds----ddLISMGSNDiei-lkkIDIPSVFIGEASANSLKEEf 162 chicken
CAK95090      75 dYANSKILLVERGeCLNFKKAINAQNYGYVMLIIVDDtn----qeLNLGARNDses-nldIRIPTIMISKNQGNILKNFl 149 Paramecium tetr...
CAK61079      68 pAQGSQFLLIERGeCTFVTKVRNAQNAGYSLAIIGNNndd--pltSDFVMADDghg--hsVSIPSIFITSRDFQILKQYs 143 Paramecium tetr...
CAK63118      66 sKDHDFIFIERGK-CTFVTKVKNAQNAGYKFVIIGDNaned-idnSFTMLNDGqg---ssVHIPSIIIGSKWSKEFKDIf 140 Paramecium tetr...
CAK59399     117 lAQGSQFILMERGnCSLVSKVMNAERAGYSLAIIGNDne----rpLDSDLVMEddgqgylVNIPSIIISQRDFFIMRDYv 192 Paramecium tetr...
CAK87836      71 qTAKSNFVLIKRGgCSFVTKVRHAQKAGYQLAIIEDDkae--iidNITMSDDGtg---ygLQIPSIFISKSDGEVLTKYl 145 Paramecium tetr...
CAK65401      76 dYSNVKVLLVQRGnCTFYTKTINAQSFGYQMLVIVDDmde---eiTGLNLVSLnet--keIDIPAIMISKKQGDIIKQYm 150 Paramecium tetr...
XP_001027786  87 nQNSAIAYLIERGqCSFVSKSRNAQNSNGKVAIIFNDkknegvndIVLMDQSDhsg--kgLMISTIFVTKKTGDTILNYv 164 Tetrahymena the...
AAX25997      95 aSTLPYISLIKRGnCSFSRKTIAAERGGYIAAIIFNDed----dsTFPMGHNMse----vINISAVMVGLSNGELLLKKy 166 Schistosoma jap...
CAK69088      65 pTYGAHFILIERGnCTFVTKVKNAEKAGYQMAIIGNYnde--qmqYDFTMADDgyg--yqVSIPSIFIKKKHFDILTKNa 140 Paramecium tetr...
Feature 1                          
Q90972       163 tyekgghvvlipEFSLPL 180 chicken
CAK95090     150 -----------lQINHKN 156 Paramecium tetraurelia
CAK61079     144 tr--------igDNLDDK 153 Paramecium tetraurelia
CAK63118     141 sny-----atisEYSIKL 153 Paramecium tetraurelia
CAK59399     193 ksl------gvvEVSDEK 204 Paramecium tetraurelia
CAK87836     146 kspkvkseadqiQLLIKF 163 Paramecium tetraurelia
CAK65401     151 da--------itSDRVYI 160 Paramecium tetraurelia
XP_001027786 165 sn--------nkDEPIRI 174 Tetrahymena thermophila SB210
AAX25997     167 c---------vpHYFVEI 175 Schistosoma japonicum
CAK69088     141 qsy-----kvedPNDLKI 153 Paramecium tetraurelia

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