Conserved Protein Domain Family
bact_SoxC_Moco

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cd02113: bact_SoxC_Moco 
bacterial SoxC is a member of the sulfite oxidase (SO) family of molybdopterin binding domains. SoxC is involved in oxidation of sulfur compounds during chemolithothrophic growth. Together with SoxD, a small c-type heme containing subunit, it forms a hetrotetrameric sulfite dehydrogenase. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate.
Statistics
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PSSM-Id: 239031
Aligned: 10 rows
Threshold Bit Score: 592.066
Created: 13-Jan-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Moco bindingmetaldimerization
Feature 1:Moco binding site
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     ## # #                                                #           
YP_144677    75 PLEKLEGVITPNGLHFERHHAGAPQVDPRHYRLVIHGmv----eRPLVLTl-EDLKRFPSVTRTYFIECAGNGQNgyrnp 149 Thermus thermoph...
ZP_00310150  83 PLQDLYGTITPSDLHFERHHAGMPDINPEAYELIIHGmv----dKPKKFSl-QDLKRFPSVSRICFLECSGNYRTgketm 157 Cytophaga hutchi...
ZP_00245344  99 PLEELEGIITPTGLHFERHHNGVPDIDPAQHRLLIHGrv----kRALSFCv-DDLLRYPMRSQLLVLECGGNSNAgwhpe 173 Rubrivivax gelat...
AAU92455     87 PLERLEGIITPSGLHFERHHNGVPQIDPAVHRLVVHGlv----vKSSSFGi-DDLLRYPQTSRQCFVECGGNGNAgwhle 161 Methylococcus ca...
ZP_00242983  97 PLHQQHGTVTPNGLIYERHHNGVPEINPDEHRFAIHGmv----kQPLVFTm-SDLMKYPSVSKFYFMECSGNGLTdwlka 171 Rubrivivax gelat...
ZP_00280388  90 PLADLHGTLTPNGLVYERHHGGVPDIDPDQHRLAIHGlv----rTPKLFTl-DDLLRLPSESRIHFLECSGNTGNewngp 164 Burkholderia fun...
ZP_00348397 110 PLQGLFGIITPSGLHFERHHQGWQDVDPTKHRLMINGsddsllkKPKVYTm-DELMRLPSVSRIHFIECGANTGLewgnv 188 Dechloromonas ar...
NP_772761    93 PLQELDGIITPNGLFYERHHGGVPTIDPAQHRLMLHGlv----eRPLIFTi-DDLRRFPSESRIHFLECSGNPGYtkpyg 167 Bradyrhizobium j...
AAF61449     95 PLYALDGIITPNGLCFVRHHGGEAEIDPARHRFMIHGmv----dKPLVFTmeDIKRMPGRTNRAYFLECAANSGMewrga 170 Starkeya novella
NP_949800    99 PLHALDGIITPSGLCFERHHGGVAEIDPAQHRLMIHGlv----dTPLVFTm-DDIKRMPRVNKIYFLECAANSGMewrga 173 Rhodopseudomonas...
Feature 1                                                             #                         
YP_144677   150 pdpeltatrsrgLASNASWTGVPLALLLKEAGvkp-----garWLIPEGMDAAMYTRSLPLEKAm-eDVLVAYAQNGEAL 223 Thermus thermoph...
ZP_00310150 158 t-----aqeicgMTSQSEWTGVMLSTLLREVGird-----taqWLLAEGGDAAVMTRSIPVTKAl-dDAMIVYAQNGEAL 226 Cytophaga hutchi...
ZP_00245344 174 piq-rpvgsfhgLVSCSEWTGVPLSVLLDEAGiep-----rttWAVAEGADAFAMNVSLPVAKLm-dDAIVALYQNGERL 246 Rubrivivax gelat...
AAU92455    162 pmq-apagnvhgLASCSEWTGVPLATVLEECGlqp-----nakWLIAEGADAAAMNVSIPLEKAl-dDALLALYQNGERL 234 Methylococcus ca...
ZP_00242983 172 ask--tvqqthgMLSCAQWTGIPVSTLLQEAGvmp-----gatWALAEGADGAAHARSIPMQKMl-eDALIVYAANGEML 243 Rubrivivax gelat...
ZP_00280388 165 sgm--plqlthgLLSCCEWTGVRLSTLLEEVGgvpvsgnagggWLLAEGADAAAMTRSLPLDRIl-dRALVVYAQNGERL 241 Burkholderia fun...
ZP_00348397 189 avp--tvqythgMLSCSEFTGVPLKLLLEDCGvdyk----karYVLAEGADGSSMTRTIPMEMVesgEVIVAYGQNGEML 262 Dechloromonas ar...
NP_772761   168 kt----asdlvgLVSCAEWTGVSLKLVLQEAGlkp-----eakWVVAEGADAAALTRSIPIEKCl-eDAMLVYSQNGERL 237 Bradyrhizobium j...
AAF61449    171 qln--gcqythgMIHNVVYTGVPLRAFLEAAGvkp-----kgkWVLAEGADASAMTRSIPIEKAm-dDCLVAWAMNGEAL 242 Starkeya novella
NP_949800   174 qln--gcqfthgMIHNVMYTGVTLKTLLEQAGvks-----nakWLLLEGADSAGMDRSLPLEKAl-dDVMIAYAMNGEAL 245 Rhodopseudomonas...
Feature 1          #    #       #  # ##                                                         
YP_144677   224 RPEQGYPVRLVVPGWEGSIQVKWLRRILVTDLPAMAKDEtSEYTDVTADGRVLAFTWVMEPQSIITYPSGGqrv-qpGFH 302 Thermus thermoph...
ZP_00310150 227 RPQQGYPVRLLLPGWEGNTNIKWLRRIEVSDAPFMTREEtSKYTETIKGGFYRQFSFDMDARSIITFPSYPrqv-ekGWI 305 Cytophaga hutchi...
ZP_00245344 247 RPEHGYPLRLIVPGWEGVLNVKWLRRLQLSEQPLMARNEtAKYTELLPDGKARMFTFVMEAKSLITSPSHGqhlrgpDVY 326 Rubrivivax gelat...
AAU92455    235 RPENGYPLRLILPGWEGVTNVKWLHRLQLAEQPAMARNEtAKYTELLPSGQARQFSFVMEAKSLITRPSAGqslpgpGLH 314 Methylococcus ca...
ZP_00242983 244 RPENGYPLRLFIPGWEGNVSIKWLRRIKLGDQPWNLRSEtARYTDPMPDGKWRQFSFAMEAKSVVTSPSGGmtv-rpGEI 322 Rubrivivax gelat...
ZP_00280388 242 RPENGYPLRLIVPGFEGNTNVKWLRRLKVVDAPLQTREEtSKYTSLLANGKARQFAFEMDAKSVITRPSPGhrlttqGYY 321 Burkholderia fun...
ZP_00348397 263 RPENGYPLRLVVPGVQGVSWVKWLRRIEVGDMPYATKDEaVHYIDLLPSGLHRQYSSIQEAKSVITTPSGGqtlvekGFF 342 Dechloromonas ar...
NP_772761   238 RPQQGYPLRLFLPGFEGNMSVKWLRRLHVTAEPVYSREEtSKYTDLLSDGTAREFSFYMEAKSIITRPSGGqrlsapGFH 317 Bradyrhizobium j...
AAF61449    243 RPEQGYPLRLVVPGWEGNMWIKWLRRVEIGDQPWGQREEtSKYTDLLADGRSRRFTFFMDAKSVVTNPSPQaplrakGPN 322 Starkeya novella
NP_949800   246 RPENGYPLRAVIPGWQGNLWVKWLRRIEVGDMPWQTREEtSKYTDLMPDGRARKHTFVMDAKSVITSPSPQmplkfkGRN 325 Rhodopseudomonas...
Feature 1                                                                                       
YP_144677   303 EIRGLAWSGFGRIAKVEVSFDEGRTWRKAVLEPPVEPYAFVRFKLPWYWDGKEVVLWSRAWDEKGNTQPTREEFFRRWSr 382 Thermus thermoph...
ZP_00310150 306 EIQGIAWTGRGKVLRVDITTDAGKTWLPAQLQEPVLDKAHVRFRFLWNWNGDETEIASRVTDETGYQQPFLKQLLEARGg 385 Cytophaga hutchi...
ZP_00245344 327 AISGLAWSGRGRIRRVEVSADGGRSWADATLQDPVLPRCMTRFRAAWKWDGRPTVLKSRATDETGDVQPERSALVAQRGt 406 Rubrivivax gelat...
AAU92455    315 PISGLAWSGRGAIRRVEVSADGGKTWQDAALDPPVLPKCFTRFRLPWRWDGSPAVLKSRATDETGYVQPERQTLIAERGr 394 Methylococcus ca...
ZP_00242983 323 EILGFAWSGQGSIRAVDVTLDGGRTWQEATLEPPVLDKCLTRFRLRWKWDGRPTSIASRAVDSTGYVQPTVEEIKKVRAi 402 Rubrivivax gelat...
ZP_00280388 322 PITGLAWSGRGTIRKVEVSTDGGATWRAARLVGAIHDRALTRFEADWRWDGGAAAILSRATDSTGYLQPTRAELVAARGl 401 Burkholderia fun...
ZP_00348397 343 NVSGLAWSGRGRIKQVDVSFDGGLNWQTARLEGPVQNKALTRFNINWVWDGSPAILQSRATDETGYVQPSYGQLRKVRGt 422 Dechloromonas ar...
NP_772761   318 EVTGIAWSGHGKIARVEVSVDDGRSWQDARLQEPVLTRALTRFRLPWQWDGKPAVIQSRAIDETGYVQPTLAELLAVRGe 397 Bradyrhizobium j...
AAF61449    323 VVSGIAWSGRGTITRVDVSLDGGKNWTTARIEGPALPRSMTRFYLDFDWNGQELLLQSRAMDDSGYLQPTKAELRAVRGe 402 Starkeya novella
NP_949800   326 VLTGIAWSGRGTVKRVDVSMDGGRNWCEARIDGPVLNKSIVRFYVDFDWNGEELMLQSRAIDETGYVQPTKAELRKIRGv 405 Rhodopseudomonas...
Feature 1                           
YP_144677   383 n-nrYHYNAIQAWRILPDGR 401 Thermus thermophilus HB8
ZP_00310150 386 vsggYHFNPVTFWRVKKDGL 405 Cytophaga hutchinsonii
ZP_00245344 407 n-gyFHYNAIVSWAVDEEGN 425 Rubrivivax gelatinosus PM1
AAU92455    395 h-gyFHYNAIVSWAVAADGS 413 Methylococcus capsulatus str. Bath
ZP_00242983 403 tgfvQHHNGIFPWSIDAAGE 422 Rubrivivax gelatinosus PM1
ZP_00280388 402 n-sqYHYNAIQQWRVDESGE 420 Burkholderia fungorum LB400
ZP_00348397 423 k-siYHNNAIQSWKVVESGE 441 Dechloromonas aromatica RCB
NP_772761   398 n-yfYHNNAIWPWLIAADGE 416 Bradyrhizobium japonicum USDA 110
AAF61449    403 n-siYHNNGIQTWLVRSNGE 421 Starkeya novella
NP_949800   406 n-svYHNNGIQTWLVHPDGV 424 Rhodopseudomonas palustris CGA009

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