1SOX,1SOX,1OGP


Conserved Protein Domain Family
SO_family_Moco_dimer

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cd02110: SO_family_Moco_dimer 
Click on image for an interactive view with Cn3D
Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO).
Statistics
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PSSM-Id: 239028
Aligned: 39 rows
Threshold Bit Score: 283.037
Created: 13-Jan-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Moco bindingmetaldimerization
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:Moco binding site
Evidence:
  • Structure:1SOX; chicken liver sulfite oxidase

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ## # #                                                   #                     
1SOX_A      134 LFFTRNHlpvpa------vepsSYRLRVDGpg-gGTLSLSlAELRsrfpKHEVTATLQCAGNRRSemsrvrpv----kgl 202 chicken
NP_800653   112 RHFIRNNgippt-----dvnpeTWTLTIDGlv-dKPMSLSiADLKknfdVVEQQLVVECGGNGRAffdpkas------gn 179 Vibrio parahaemo...
YP_178034    82 NFFVRNNglppsletikerlhkGWTLEIDGesiiNKKSYTiEDLKkkfkTYTYALTVECGGNGRSevipstk------gt 155 Campylobacter je...
NP_386938    74 KLYIRNNvntppes--iladrdGWKVEISGv--kEPRTLTvAELKtl-gLVTAATVLQCSGNGRKyfkdqltgdqkmsgt 148 Sinorhizobium me...
AAF64400     83 AFFVRYHlagipl----eidpdAFRLEIKGkv-gTPLSLSlQDLKndfpASEVVAVNQCSGNSRGfveprvg------gg 151 Starkeya novella
YP_144591    73 ILYIRNNvdlpgyntvegasldGWKVEVGGlv-dKPFTFEaKELLel-pQHEVTMVLQCSGNGRSlfqprts------gn 144 Thermus thermoph...
ZP_00276145  86 AFFVRYHwsgipt----svdpqTYRLRIGGkv-kTPLELSlADIKaiaqPMEVVAVNQCSGNSRGflaprvn------gg 154 Ralstonia metall...
AAQ57837     78 AVFVRYHlaghpl----didpaAHTLTIDGkv-rRPLTLTlSELQrf-pRFKQTVVMQCAGNGRGlfqprvq------ga 145 Chromobacterium ...
BAA89396     90 RFFVRYHladvpv----aidtdKYTITISGav-nEEVTLSlAELKsiegQQEIVAVQQCTGNSRGyssprvf------ga 158 Moritella marina
YP_004930    72 ILFIRNNqvlpqgktlepiapdGWIISIEGmv-eNAQAFDaKILKdl-pQVEVEMVLQCSGNGRSffaraqra----sgt 145 Thermus thermoph...
Feature 1                                                             #                         
1SOX_A      203 pwdigAISTARWGGARLRDVLLHAGfpeelqgewHVCFEGldad-----pggaPYGASIPYGRAlspaaDVLLAYEMNGT 277 chicken
NP_800653   180 qwtygAVACSSWTGVRLADVLKAAGvkd---gaiYTAHYGadkhls-gkegklPISRGVPIAKAmg--sENLIAFAQNGE 253 Vibrio parahaemo...
YP_178034   156 qwgygAVACGRWTGVRLKDILKDCGikn---davYIGYYGidtkln--geetsPISRGVPISKAlq--dETLIAWAYEGK 228 Campylobacter je...
NP_386938   149 pwtvgAAGCVIWSGVPLKAVVDALGgpae--garFITGTGgeelpagldpkllVVERSVPISNLd----NVILAWEMNGR 222 Sinorhizobium me...
AAF64400    152 qlangAMGNARWRGVPLKAVLEKAGvqa---gakQVTFGGldgpv---ipetpDFVKALSIDHAtd--gEVMLAYSMNGA 223 Starkeya novella
YP_144591   145 pwkrgGVGNVTFRGVRLKDLLEAKGvklg-ekalYITAHAsrqg------napEFVRSVPIHALg----HALLALSMNGE 213 Thermus thermoph...
ZP_00276145 155 qlangAMGNARWTGVPLKAVLERAGvqp---gavQVSFNGldrpp---ldnspDFVKSLDIDHAld--gEVMLAWSMNGE 226 Ralstonia metall...
AAQ57837    146 qlgngSMACVEMAGARLADVLAAAGvid---garQIACRGtdqpa---levtpAFVRSLDLADAlr--pEAMIAWEMNGQ 217 Chromobacterium ...
BAA89396    159 qlsngAMGNAKFKGVPLKNVLAKAGiss---aatSVIIDGldkpv---rdttpDFQKSLPIDHImt--gEPMLVWEMNGE 230 Moritella marina
YP_004930   146 qwkhgGMGNVVFKGVPFKVLVEHLKlniy-pgakYVTVNGkdqpp---tlqapDFEHSVPLEEAl---eKGILALEMNGE 218 Thermus thermoph...
Feature 1            #    #       #  # ##                                                       
1SOX_A      278 ELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQqndykgfspcvdwd-----------tvdyrtapaiqelP 346 chicken
NP_800653   254 ALHPMNGAPLRLVVPGWPGSCSQKWLTRIQIRDQIHDGPKMtgtsyrvpnrpvapg---------envakedfeiiermP 324 Vibrio parahaemo...
YP_178034   229 DIPLVNGYPLRLVCGGYPASTSGKWLYKISVRNKIHDGEKMegsykvpvnpvkpg----------dfnykgemkiiesmP 298 Campylobacter je...
NP_386938   223 PLSLAHGGPLRMVVPGYSGVNNIKYVKAVAMTEVETDAKIQktsyrvhalgek---------------gspdqpsvweqP 287 Sinorhizobium me...
AAF64400    224 DLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMktayripdnacacte---------pgkaptatipinrfD 294 Starkeya novella
YP_144591   214 PLPAVHGGPIRLVFPGYFGVNNVKWVQKIEFTEAENTTAEQmpryrvpaipnanipflpqepgktypysftnsrpnwlvA 293 Thermus thermoph...
ZP_00276145 227 DLPMLNGYPLRLVVPGHYGTYWVKHLSDITVLDKPFDGFWVqsayripdnaganve---------pgsapartrpigrfN 297 Ralstonia metall...
AAQ57837    218 PLPVLNGYPIRLVIPGFYAAYWIKHLSHIEVLDHVFDGWFAsqaytvpdtpdngvp---------pgtkpdrtarltrmK 288 Chromobacterium ...
BAA89396    231 PLPFLNGFPVKLIVPGWYATYWVKHVSHLKVIEGEFDNFDAffmttayrlpdndsks------elptarakktlpvnrfP 304 Moritella marina
YP_004930   219 PLPAAHGGPVRFVMPGFYGTMNVKWVDRIRFDVAETFNHNQipryrvpnhpiqpgs--------efnftfensrpnwhqK 290 Thermus thermoph...
Feature 1                                                                                       
1SOX_A      347 VQSAVtqprpg-aavppgELTVKGYAWSGGg-REVVRVDVSLDGGrTWKVARLMgdkappgraWAWALWELTVpveagte 424 chicken
NP_800653   325 VKSLItspqtn--tevngNEIAIRGHAWSGd-RKVTKVQISIDFGaTWMDADLAapa----ndGAWQTFNAKVkfpqagy 397 Vibrio parahaemo...
YP_178034   299 IRSVItnikng-seikanKKFEVRGKAWAGe-LEVSEVYVSNDYGvTWTKAKVEkpl----nrLAWQKWSAQIsiptkgy 372 Campylobacter je...
NP_386938   288 VKSWIttphe----aakaGQVQIAGVAFGGm-NACKSVEVSVDGGqTWQEAEFIgpd---lgrFAWRVFALSAdla-rgt 358 Sinorhizobium me...
AAF64400    295 VRSFItnveng--asvkaGEVPLRGIAFDGg-YGITQVSVSADAGkSWTNATLDpgl----gkYSFRGWKAVLplt-kgd 366 Starkeya novella
YP_144591   294 INSFIfapleg--qtvegPYVRVEGVAFNDgiVPLVSVEVSANGGrTWQQARLErqe----ksFGWVRWQATLylr-pge 366 Thermus thermoph...
ZP_00276145 298 VRSFItslteg-atvpsgRETVVRGIAFDGg-YGIAEVAFSADGGrSWTEATLGqdl----gkYSFREWRAAFrpprkga 371 Ralstonia metall...
AAQ57837    289 VRSFIthpahgdaiaapdGRLALRGIAFDGg-SGIRRVDVSADGGdSWRQAELGpdi----grFAFRPWTLTLdgvkpgp 363 Chromobacterium ...
BAA89396    305 IRSFVtsleng-devnaaTSIEIKGIAFDSg-SGIKKVEVSVDGGnKWMQAALGenl----grFSFRGWKLSHnfnekgr 378 Moritella marina
YP_004930   291 VKSVIfapldg--eevkaGNVLVRGVAWNDglVPIEAVLVSTDQGrTWIRAKLTspq----spYAWFHWETYVals-rge 363 Thermus thermoph...
Feature 1                                             
1SOX_A      425 LEIVCKAVDSSYNVQPDsvapiwnlrgvlsTAWHRVRV 462 chicken
NP_800653   398 YEVWAKATDDQGVSQPFaiawnp--kgylnNTFHRIAL 433 Vibrio parahaemolyticus RIMD 2210633
YP_178034   373 YEIWARAIDSQGNSQPMvlaqwn-pggyinNACHRVNV 409 Campylobacter jejuni RM1221
NP_386938   359 YTLVSRATDTEGNVQPEetemng--agyghNGWRAPAV 394 Sinorhizobium meliloti 1021
AAF64400    367 HVLMCRATNARGETQPMqatwnp--agymrNVVEATRV 402 Starkeya novella
YP_144591   367 HEVMARAWDAVGRSQPLdgniawnergyeyNGVMRVKF 404 Thermus thermophilus HB8
ZP_00276145 372 YDLRVRAVNRIGQSQPMtalwnp--agymrNVVETTRV 407 Ralstonia metallidurans CH34
AAQ57837    364 LTLMARAAANDGQRQPLrqpwnp--ggyarNVAERVEI 399 Chromobacterium violaceum ATCC 12472
BAA89396    379 TLVMVRATGKSGETQPLnaswnh--ggynrNAIERTSI 414 Moritella marina
YP_004930   364 REIWVQAVDKLGRAQPLdgtvhwnprgyewNGVDIVKV 401 Thermus thermophilus HB27

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