2C31


Conserved Protein Domain Family
TPP_BZL_OCoD_HPCL

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cd02004: TPP_BZL_OCoD_HPCL 
Click on image for an interactive view with Cn3D
Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL cleaves the acyloin linkage of benzoin producing 2 molecules of benzaldehyde and enabling the Pseudomonas to grow on benzoin as the sole carbon and energy source. OCoD has a role in the detoxification of oxalate, catalyzing the decarboxylation of oxalyl-CoA to formate. 2-HPCL is a peroxisomal enzyme which plays a role in the alpha-oxidation of 3-methyl-branched fatty acids, catalyzing the cleavage of 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde. All these enzymes depend on Mg2+ and TPP for activity.
Statistics
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PSSM-Id: 238962
Aligned: 50 rows
Threshold Bit Score: 168.48
Created: 4-Nov-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
TPP-bindingdimer interface
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:TPP-binding site
Evidence:
  • Comment:TPP = thiamine pyrophosphate or thiamine diphosphate
  • Structure:2C31; Oxalobacter formigenes Oxalyl-CoA decarboxylase binds thiamine-2-thiazolone diphosphate; contacts at 3.5A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      #                      ####                      # #                           #
2C31_B     377 YSNSLGVVRDFMLanpdISLVNEGANALDNTRmivdmlkPRKRLDSGTWGVMGIGMGYCVAAAAVTg-----KPVIAVEG 451  Oxalobacter form...
AAF57501   367 YYAVFHHLRELLPk--dTIIVSEGANTMDIGRsmllneqPRHRLDAGTFGTMGVGPGFAVAAALFCrdfapgKRVLCVEG 444  fruit fly
NP_496455  434 YYAAYQPIREFLAnn-dVIVINEGANTMDIGRtmmpsrlPKRRLDAGTFGTMGVGHGFSLAAALWArdhspkTKVLVVQG 512  nematode
Q9UJ83     377 YYTVFYHVQEQLPr--dCFVVSEGANTMDIGRtvlqnylPRHRLDAGTFGTMGVGLGFAIAAAVVAkdrspgQWIICVEG 454  human
NP_998250  367 YYTAFHHISELLPk--dCIIVSEGANTMDIGRtmllnhlPRHRLDAGTFGTMGVGPGFAIAAAVLEqaqrfgQKVVCVEG 444  zebrafish
AAH77507   376 YYTVFQYVKESLPn--nCIIVSEGANTMDIGRtilqnyhPRHRLDAGTFGTMGVGLGFAIAAAMITkdecpeQRVVCVEG 453  African clawed frog
XP_418737  367 YYTVFHHIRELVPk--dCILVSEGANTMDIGRtmlpnyhPRQRLDAGTFGTMGVGLGFAIAAALVAkdrtpeKRVICIEG 444  chicken
XP_791292  376 YYAAISKVQAMIPk--dSLIVSEGANTMDIGRtillnhsPRHRLDAGTFGTMGVGMGFNIAAALLArdrwpnKRVVCLEG 453  purple urchin
XP_629587  387 YHKVFNALRVGGLfqedTIFVNEGANTMDIGRlcipqtlPRSRLDAGTLATMGVGVGYSVAAQICFp----dRSVVCIQG 462  Dictyostelium di...
XP_625116  354 YYAVFKHIQDVLPs--dCIICSEGANTMDIGKmillnnkPRHRLDAATFGTMGVGLGFGIAAALYCknyaptKRVLCIEG 431  honey bee
Feature 1      ###                        # # #                                                
2C31_B     452 DSAFGFSGMELETICRYNLPVTVIIMNNGGIYKGNEADPqp-----------gVISCTRLTRGRYDMMMEAFGGKGYVAN 520  Oxalobacter form...
AAF57501   445 DSAFGFSGMEIETMVRYKLPVTIVIVNNNGIYGGFDKDTfeairse-gdltqiTPPSALGVQVRYEEMMKMFGMKGYFCT 523  fruit fly
NP_496455  513 DSAFGFSAMELETIARYNLPVVTVIINNSGIYRGLLPEDdkaieg---drtlaLPVLSLTAECRYEEMCKAFGGAGTVVR 589  nematode
Q9UJ83     455 DSAFGFSGMEVETICRYNLPIILLVVNNNGIYQGFDTDTwkemlkf-qdatavVPPMCLLPNSHYEQVMTAFGGKGYFVQ 533  human
NP_998250  445 DSAFGFSGMEAETMCRYKLPIIIIVINNNGIYSGVDPETwkamekm-gdmttiAPPVTLLPEARYEQVMSAFGGHGYLVR 523  zebrafish
AAH77507   454 DSAFGFSGMEAETMCRYNLPIIIIVVNNNGIYNGFDEGTwnemiks-gdpatiAPPVALMPNAHYEQVMMAFGGKGYFAR 532  African clawed frog
XP_418737  445 DSAFGFSGMEVETICRYNLPILIIVVNNNGIYTGLDAGSwkemlqy-gdpvtsVPPVSLLPNAHYEEIMSAFGGKGYFVN 523  chicken
XP_791292  454 DSAFGFSGMEVETICRYNLPVLIVVINNNGIGFGTEKETweiisni-efvslnLMPTALMPDARYDQVMTAFGGVGFHVT 532  purple urchin
XP_629587  463 DSAFGFSAMEMEVAVRYKLPIVFIVLNNNGVYEGLESMSdpkytsstesaslhIPPTSLSVDTKYELIMQSFGGTGYSIS 542  Dictyostelium di...
XP_625116  432 DSAFGFSGMEIETMFSNNNGIYSVLIKKHSDKYKPQVNQh------------kTPPNCLTSETHYEKMLEMFGRKGYFCT 499  honey bee
Feature 1                                  
2C31_B     521 tPAELKAALEEAVAs--gKPCLINAMID 546  Oxalobacter formigenes
AAF57501   524 eIEQLQAAVKAANQlt-dRPTIINVAIS 550  fruit fly
NP_496455  590 tVPEIKAALEKAFQkt-dGPTVINALIS 616  nematode
Q9UJ83     534 tPEELQKSLRQSLAdt-tKPSLINIMIE 560  human
NP_998250  524 tVEELRTALQDSLKnt-qMPSLLNVLID 550  zebrafish
AAH77507   533 tPEELQNALRASFAek-nGPSLINVMID 559  African clawed frog
XP_418737  524 tPEELQNAVKASLAdk-qTPSLINVMID 550  chicken
XP_791292  533 tPAELEDALRLSLTkhanQPVLINVMVS 560  purple urchin
XP_629587  543 tISNLLDICKQIKSkqisLPTLLNIKIK 570  Dictyostelium discoideum AX4
XP_625116  500 tVQDIQQALKICLQit-dSPSLLNIMIN 526  honey bee

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