Conserved Protein Domain Family
TPP_ComE_PpyrDC

?
cd02001: TPP_ComE_PpyrDC 
Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase). Methanococcus jannaschii sulfopyruvate decarboxylase (ComDE) is a dodecamer of six alpha (D) subunits and six (E) beta subunits which, catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde in the coenzyme M pathway. Ppyr decarboxylase is a homotrimeric enzyme which functions in the biosynthesis of C-P compounds such as bialaphos tripeptide in Streptomyces hygroscopicus. Ppyr decarboxylase and ComDE require TPP and divalent metal cation cofactors.
Statistics
?
PSSM-Id: 238959
Aligned: 4 rows
Threshold Bit Score: 215.815
Created: 4-Nov-2004
Updated: 17-Jan-2013
Structure
?
Aligned Rows:
 
TPP-binding
Feature 1:TPP-binding site [chemical binding site]
Evidence:
  • Comment:TPP = thiamine pyrophosphate or thiamine diphosphate
  • Comment:Based on known TPP and divalent metal ion binding sites of other family members.
  • Citation:PMID 9665697

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                   #                          ####     
O86938      197 RIAALERLLAelprdAAVVSTTGKSSRELYTLDDrdqHFYMVGAMGSAATVGLGVALHTp----RPVVVVDGDGSVLMrL 272 Streptomyces vir...
ZP_00379231   3 RIEALDVLNElt-aeLPVVVTCAATSRELSSVENrdnHFYVLDSMGLVGSITTGLALAAkdsdlPKVIGLEGDGSLLMnP 81  Brevibacterium l...
AAG29796    185 KAAAIAEIIGas-gdTPIVFTTGYACRIANDIQDkpgHFYMLGSMGLAGCVAVGVAAGLs----RPVIVVDGDGSLAMnP 259 Streptomyces ris...
P58416        5 RIDIIKKIVEnvgekEIIVSNIGIPSKELYYVKDrerNFYMLGSMGLASSIGLGLALNCe----DKVIVIDGDGSILMnL 80  Methanocaldococc...
Feature 1                           # #                                                         
O86938      273 GSLATVGAhapGNLVHLVLDNGVHDSTGGQRTLSs-aVDLPAVAAACGYRAVHACtslDDLSDALATAla--tdGPTLVH 349 Streptomyces vir...
ZP_00379231  82 NVLPTGGFlgaEKLFLILLDNQVYGSTAGLPTYSs-rVDLGALAQAAGWTVGRAAd-eSQLRGEFARLlt--ttGPTLLH 157 Brevibacterium l...
AAG29796    260 GVLLLAAEftgLPLIHVVLDDRAYSSTGAQPTPPv--GNIESWAASLGYLVLSPPl-aGGVGSVVAGLlageltRPHLLR 336 Streptomyces ris...
P58416       81 GSLSTIGYmnpKNYILVIIDNSAYGSTGNQKTHTgknTNLEEIAKGCGLDTITTEs-lEEFEKEFKNAln--eeKCKVII 157 Methanocaldococc...
Feature 1             
O86938      350 LAIRPG 355 Streptomyces viridochromogenes
ZP_00379231 158 ASIEAG 163 Brevibacterium linens BL2
AAG29796    337 LPVAPD 342 Streptomyces rishiriensis
P58416      158 AKTIPY 163 Methanocaldococcus jannaschii

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap