Conserved Protein Domain Family
Nitrogenase_VnfE_like

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cd01972: Nitrogenase_VnfE_like 
Nitrogenase_VnfE_like: VnfE subunit of the VnfEN complex_like. This group in addition to VnfE contains a subset of the alpha subunit of the nitrogenase MoFe protein and NifE-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protein for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Statistics
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PSSM-Id: 238932
Aligned: 8 rows
Threshold Bit Score: 580.915
Created: 3-Nov-2004
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_947693    56 ESPFSQGSTCSEQIAESQASNVRDAVLVQHSPIGCAAGHInsnAFFRNGLmrrglaprnvtgLSSNLIERDMIYGGAEKL 135 Rhodopseudomonas...
NP_947708    55 STPFAQASMCAEHIAVTNATIIQDSVVVQHSPIGCAASQSftaRYYRDLAarrgwkledpksICTNLGEQDMVFGGVARL 134 Rhodopseudomonas...
AAC44383     30 TLQGSHTRPCKFGAATKILSGIKDAIVISHGPSGCAYGVKrayKLTNSRNsgsp----yepvVTTNMSEKAVIFGGEKEL 105 Anabaena variabi...
NP_616158    43 KLQGSHTRPCKFWTAMKILSGIKNAVVIAHGPSGCAFGVKqtyKLTNCRNsgsp----yeavITTNIDEKAVVYGGEREL 118 Methanosarcina a...
NP_616561    33 KLQASHAPMCKFFTSYYVISGIRHVVPLVHGPTGCPLYMSdfvRTRECCEirgip---leptACTALNESHVIYGGEGKL 109 Methanosarcina a...
CAA43133     27 RDCIDMHQFCAFWGAFDILNYFNDVVILVHGPSGCLGNRRflpAMGHLGEcdn------kphLSTSFTNREVVFGGEKKL 100 Clostridium cell...
ZP_00909155  55 EGPFAQGSGCSEEMVECQAGQVRDAVLIQHSPIGCGAGQVgnnRLFRFGLatrnlpienvkiMSTNLLEGDMVFGATKKL 134 Clostridium beij...
ZP_00911913  44 PRKFSQCMGCNAGHAFCQLSMIRDAVVVNHAPIGCAGDFFgfnFTYRVEQmkrelpatigryFSTCIEEKDTVFGAAKKL 123 Clostridium beij...
NP_947693   136 RATIKAAVERHQPKAVFVATSCATGIIGDDVESVVRDCEDELGVPVVAMYCEGFKSkHWSSGFDAIQHGVLRhvvkpk-- 213 Rhodopseudomonas...
NP_947708   135 EDTIRDAYERHKPRVIFVATSCATGIIGDDVDGAAKRVEDEIGIPVVTLHCEGFKSkHWSSGWDVIEHGILRrlvpep-- 212 Rhodopseudomonas...
AAC44383    106 RGAILEVDQKYHPDAIVVATSCASGIIGDCVDEVVGKARSEIDAEIMTIHCEGFAG-EYRSGFDIVFRQIVDfmepptp- 183 Anabaena variabi...
NP_616158   119 KGAIQEVDSKYKPDIIFVATSCATGIIGDYVDAVVSRVRPEINAKIMAVHCEGFAG-EYRSGFDLVFRQIVQlmdkpds- 196 Methanosarcina a...
NP_616561   110 LEAVKEAYAKYHPDLIVILSCCCSGIIGDDVESIAREAEKLIGCRVLALRSEGFGG-DFRSGYEDAFKLIMElmepp--- 185 Methanosarcina a...
CAA43133    101 VDSLNEVNSRYNPKIIAVLTNCCADIIGDDVEGCIEGLPDEIREKVIYLNSGGYSGkSYRRGTEMAFKLLAKhlqtnqht 180 Clostridium cell...
ZP_00909155 135 KQTVEDAYKRYKPKTIFIVSSCATGIIGEDIESVSSEYEKKLKIPIVPLICEGFKSkHWTTGFDATQHGILRqivnkh-- 212 Clostridium beij...
ZP_00911913 124 EDTVREAYKRTKPNAIFVTTSCASGIIGEDVDAITENLSKELGIPVISCSCEGFRSkIWTTGFDAAYHSILRklvkp--- 200 Clostridium beij...
NP_947693   214 -pgprqdNLVNIIVLWGs----------dVFTPMLAELGLEANNILtv-aSVDEIARASEAAASATFCYSVGGYLGAALE 281 Rhodopseudomonas...
NP_947708   213 --prkqpDLINVIHLGGp----------dVFSPLLNPLGLRVNLVMgg-nTLERLAQMSEAAATVTMCFVLSYLATGLEQ 279 Rhodopseudomonas...
AAC44383    184 erqaqlaDSVNIVGAKMgpertevegdvkELKRLIKGMGARVHSVIagdcTLEELKQAPSAAVNCTLCLDLGYTIGKAMS 263 Anabaena variabi...
NP_616158   197 esrvalaSSVNIVGGKMgperteidtdvkELRRLIEDMGASVNAIIagncSLEEIQRAPSVAVNCTLCLDLGYAIGREML 276 Methanosarcina a...
NP_616561   186 --ktkmkGTINILGARWgptptefnwdmdEIERLLGEVGIKINAIIaggcTVEQLRHAREVELNASWCFDWGQKLGDLMQ 263 Methanosarcina a...
CAA43133    181 iditnqeKSVNLFLRRWiwdqtk-qeeinEIKRMFQMIGVRLNKIFnqglSFEDFYEMQNAQLNVALCLFFGMGLFSELN 259 Clostridium cell...
ZP_00909155 213 --pkkqeDLINIITLWGs----------dVYTPMFRELGLRVNFVIdl-aSVEDLERLSEAAGTVSFCYTLSSYLSAGLE 279 Clostridium beij...
ZP_00911913 201 --prkktNKINVANFWGs----------hIFDEFLNRLGYEAQYIVpf-sTVAELEYISEAAATIHICPSLSTYLGAALE 267 Clostridium beij...
NP_947693   282 EqYGVQEIKAPQPYGFDGTDAWLRALAKATgreeRAEAYIAREHARVRPQIERLRERLKGVRGYVAMGAAYAHGViGVLR 361 Rhodopseudomonas...
NP_947708   280 Q-FGVPEVRAPLPYGLDATDNWLRDIARLTgtsdKVEAVIASERARVAPGLARLRKALTGKRGFVAAGAAFAHGLlADLR 358 Rhodopseudomonas...
AAC44383    264 DrFGTPLNSTILPYGISATEKWLRGAAKYLkmeaQAEALMEREYAAIKTEFEAAKKYIEGKLAIIEGHDAIKCLSiAHML 343 Anabaena variabi...
NP_616158   277 DqFDTPLNSTILPYGISATERWLREAAKHLhmeaEAEALIKREYEAIRVEFEEAKKHLAGKLAIVEGHDAIKALSiAHML 356 Methanosarcina a...
NP_616561   264 ErFGIPYSRTGQPYGPEATKEWILGVAKPLgmeaEALKVIEREMEEVEPEIESLRQALSGKTAIIEISEFPGPIRaLSLA 343 Methanosarcina a...
CAA43133    260 NnFGIPYSKVTAPMGLFATKKWLHEISNILel-dVNIEELDEVKELEAQRRLLVNEIGKGRKCIIWTQTGERMLAlVKLA 338 Clostridium cell...
ZP_00909155 280 QyFGVPEIKAPQPYGFKGTDAWLREIGRVThreeLVEKYIEKEHKRVEPIIKELRKKLKGVKGFTSTGSGYSHGLiTVLR 359 Clostridium beij...
ZP_00911913 268 QeYGVKEIKAPPAYGIEGTDIWMREIGRVLgkeeEIEEIIKEEHERVLPKLEEYREKLKGKIAYVTAGAAHGHAIiAMLR 347 Clostridium beij...
NP_947693   362 ELG---VEVPGSLVFHHDPVYDSHDVRqdtLGHMIDAYGDVEHFSISNRQPyqfynl------lkrsdPDFIIIRHGGLA 432 Rhodopseudomonas...
NP_947708   359 ELG---VTVDDAFSFHHDPTTDSGDPQqdsLGHLVDAWGDIPNYTVSPDQHfqahaa------llrakPDFVICRHTGTL 429 Rhodopseudomonas...
AAC44383    344 ERDf--GMRAVIYNFHPWSTEARETSVdylLETGLDPEILITKGTLAFGKYesm-----------kqtEDELLEFIGGLD 410 Anabaena variabi...
NP_616158   357 ERDf--DMRVVIYNFHPWSTEARETSIdylLETGLDPEILITKGTLAFGKYeam-----------lqtENELLEYLGDMS 423 Methanosarcina a...
NP_616561   344 RMVaefGSHPVVINVHPYTIKERMPSIkflLEEGVNPEIILTKGLFRLGSFrssketedeletivkkyDNAIFFGNSGRF 423 Methanosarcina a...
CAA43133    339 YELe--MEPIVVGVEPSIIRDKLPIFEkeiLEDGLDVKIFVSKYIEDVNELie-------------ylGNPVIFCNNNYF 403 Clostridium cell...
ZP_00909155 360 ELG---ISVDGSLVFHHDPVYDSGNVEadsLKHLVDNYGDVKNFSVSNRQQyqfysl------lkrvnPDFILIKHGGLS 430 Clostridium beij...
ZP_00911913 348 ELG---LIVQGAAIFHHDPLYDNKDKTsdaLAQTVNIYGDIKHYNVCNKQAyelvni------lnrvkPDLMIARHGGMT 418 Clostridium beij...
NP_947693   433 GLasr--------lgvPAIALGDA----STAIGYQGMIDLGEEIVDALAQ 470 Rhodopseudomonas palustris CGA009
NP_947708   430 AVlagr-------mgiPVLPIFYS----NDGLGYEGLLTIGRAILRVLPR 468 Rhodopseudomonas palustris CGA009
AAC44383    411 ADsvvyfgsslsfphiPVVDLNAIl--nRPRFGYRGALKVAKCIKTALEY 458 Anabaena variabilis ATCC 29413
NP_616158   424 PErtvyfgssmsfpniPVVDLNAIl--nRPRFGYRGALKVAKCICTALEY 471 Methanosarcina acetivorans C2A
NP_616561   424 PPc-------------PVVNLTLMnpafQPQYGFRGIKNISALVRQALEN 460 Methanosarcina acetivorans C2A
CAA43133    404 PDqtvfky---rfaqnPVYGFNGTr--kIYQEMFNALKKKSNKYSLFVEG 448 Clostridium cellulolyticum
ZP_00909155 431 PLask--------lgiSAAPLSDE----SLTIGYQGMIYLGNKILDILAK 468 Clostridium beijerincki NCIMB 8052
ZP_00911913 419 MWgak--------lgiPTLLIGDE----QFGFGYQGVLNYASRIVETLDN 456 Clostridium beijerincki NCIMB 8052
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