1TE5


Conserved Protein Domain Family
YafJ

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cd01908: YafJ 
Click on image for an interactive view with Cn3D
Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like protein of unknown function found in prokaryotes, eukaryotes and archaea. YafJ has a conserved structural fold similar to those of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The YafJ fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Statistics
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PSSM-Id: 238889
Aligned: 73 rows
Threshold Bit Score: 116.334
Created: 21-Jun-2006
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative activeputative dimer
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #                                                                              
1TE5_A        1 MCELLGMSa----------nVPTDIVFSFTGLMQRGggt---------gphRDGWGIAFYeg--------rGVRLFQDPl 53  Pseudomonas aeru...
YP_256446     1 MCRMFAYYg----------sSWSKVEELFNCLSRSAevdpyf----nnsshKDGWGFVIVt----------RDKIIHYRs 56  Sulfolobus acido...
BAB66938      1 MCRMLAYIg-----------EKEKLKKFAECLVASAkddpi-----thdvhSDGWGIVALq----------DDDIIYYRn 54  Sulfolobus tokod...
BAD85224      1 MCRILFARg-----------IGQEVAPLFDALIKSAqndpyrekrnkktqhPDGWGYVLLr----------EENVTHYRs 59  Thermococcus kod...
ZP_01029170   1 MCRLLGFAt-----------AGSNTNLNGVLGMQNVrdfrn-----lseihNDGWGAALItvpdespyrrdGGAPTPETg 64  Bifidobacterium ...
YP_447870     1 MCELFGVSs----------qQPVHINNYLKSFYRHCnm------------hPHGWGLALMn----------NKQPHIEKe 48  Methanosphaera s...
YP_513500     2 FSNILAIS------------SDCPISPKVDLINDNVssd---------tirDFMWGIGWYhsd------hnEATILKESh 54  Francisella tula...
CAC12581      1 MCRMFLCHgnfgedagrlflALSETAKNDPLLVKAGstw---------tshSDGWGMAMLs----------DGSIRFEK- 60  Thermoplasma aci...
AAL80149      1 MCRILLAVg-----------EGQRIVPWIEAFVKASendpykeargkgrshKDGWGYVLIt----------EDYVKHYKs 59  Pyrococcus furio...
NP_125797     5 MCRILLAVg-----------NGYRMRPLVEALIKASkddpykaargrgnqhKDGWGYVLVs----------NGSIIHYKs 63  Pyrococcus abyss...
Feature 1                                         #                              ###            
1TE5_A       54 a----svDSEVARLVQRFPIKSET-----VIGHIRQANVG-KVGLSNTHPFIRelg-gryWTFAHNGQLADFQPKPGFYr 122 Pseudomonas aeru...
YP_256446    57 -------GRPIFEDTLPIKLNDQEm---iAVFHARQASAGnPIGSQFSHPYLEvnq-ngsIFLAHNGSVDKERLLKEVSm 125 Sulfolobus acido...
BAB66938     55 vn--pifKDKERLINIIDSLKNAK-----VIIHARLATDKsLVAPYLSHPYMEsne-kgiFFIAHNGSVDKQLLGEALGi 126 Sulfolobus tokod...
BAD85224     60 vl---piFNDPNAENLLNSLTEEDsq-vvLMAHARAASQG-GKTLFNVQPFQFstrhgfsFWFMHNGDLDKEALIWKAGf 134 Thermococcus kod...
ZP_01029170  65 taiykntIAARHDPIFDELANTPAr---gGLWHLRLASSNlPLILENQQPFYAn-----gLSFIHNGDISDDQGRNIITn 136 Bifidobacterium ...
YP_447870    49 pi--eatESRHLKEILKNPIYTKS-----ALAHIRLATMG-NMDVANCHPFISednngrkWVLIHNGTIFKCDLLNKYKk 120 Methanosphaera s...
YP_513500    55 ve---svDVLRSLFKDNSNFISNS-----FIGHIYSYSLF-DKTNLNLQPFVKpya-gkeWTLVHNGDLNYGYENILKLt 124 Francisella tula...
CAC12581     61 -------HSRPVYEDSVPTIISSGt----VLAHARKASPGePLGNAFSHPFYAede-ryiVLLAHNGSLDKHRIANCDPk 128 Thermoplasma aci...
AAL80149     60 rr---pvFEDEEVDELKGSISNFSv----LMAHSRAASQG-SVETFNAQPFSFgsphgyqLYFMHNGDLNKSMLLEALKl 131 Pyrococcus furio...
NP_125797    64 -------SKPIFEDEEANNLLEKLpdfgvLILHSRAASQG-KVNSFNAQPFSYasphgyqLYFMHNGDLLKELLLEGLKl 135 Pyrococcus abyss...
Feature 1                        #                                                              
1TE5_A      123 p------------vGETDSEAAFCDLLNRVRRAFpepvp--vevllPVLISACDEYRk-------kGVFNALISDGDWLF 181 Pseudomonas aeru...
YP_256446   126 n-----------seYVVDSELALKFISRFKDLYEg-----------VEVLKGYTKSAln------lFLVNISRLGEAELY 177 Sulfolobus acido...
BAB66938    127 n-----------pkLMVDSELIGKYIQKKGIEGVe-----------DLIKYTKSALN---------LLILYVDRESRKSH 175 Sulfolobus tokod...
BAD85224    135 kge--------elvNASDSYVFAAYLSKTIDNITpeeis---rrfvLGLETTRTTLN---------TGTLFLLPDGSWSA 194 Thermococcus kod...
ZP_01029170 137 rafpvdpsivqstgGRSDSAIFFAVILQYIGFGFal---------dEAVAQAVRELRksy----pkSSYNCMIQSQDQFI 203 Bifidobacterium ...
YP_447870   121 t-----------qdGNTDSERILMYIIDRLNYKErqqpls-dreqfNFINKIISKLAe-------gNKLNPIISNGTYTY 181 Methanosphaera s...
YP_513500   125 vtd-------yepvGKTDSEYILCWFLSQLRKKQirdln---ddnlFIIHELLKKINe-------vGQANLIISNGDVTI 187 Francisella tula...
CAC12581    129 c-----------ydRNTDSGLFLSYIMTFPGTVKer--------feRAIFESLKNGVfg-----klTNLLVVALDKFTMI 184 Thermoplasma aci...
AAL80149    132 pae--------kflNVSDSYVAGMYASLFITSQEd-----------EEIVKAISALKevv---ntsLNVGMILASPGKLK 189 Pyrococcus furio...
NP_125797   136 pkd--------kyeEVSDSYLAGLYLSLFIGSTSdediverlallkPTVRTSLNTGGilvtpggevKAFGTAYMSEEYLD 207 Pyrococcus abyss...
Feature 1                                                                                       
1TE5_A      182 TFCSs-----------------KLAYITRRapfgparlkdadltvdfhaettpddVVTVIATEPLTDne---nWTLQQSG 241 Pseudomonas aeru...
YP_256446   178 YLNYvspshwdrvksgrtnaspNYYDLYINs-----------------------eDGDAVFSSTLSYycselgERKAEYS 234 Sulfolobus acido...
BAB66938    176 LYYFny---------------yNKDYVKSKgipeey-------------ykmyvgENYVFSSSLAYSg-----CDKMKEA 222 Sulfolobus tokod...
BAD85224    195 FITAym---------------vNKYTNSLDdwnyarl------------ielkanDLYAVASSTLELyhe-arWRTLNNG 246 Thermococcus kod...
ZP_01029170 204 ALCAagrevt-------skrivEIYDQYGRgeqardyrvlr---yralggnddqsKGVVVASSGFDQrae-dgWTRLEND 272 Bifidobacterium ...
YP_447870   182 AHSNtr---------------nSLHYQRIN-------------------------KTIYFSTQKLNDk----pWKLVPLN 217 Methanosphaera s...
YP_513500   188 VYQDin--------------dfNPIYYSRFfppinfcnlvigdikvttglnednlRTYMIFSNIRGSgn---sWRRLEAG 250 Francisella tula...
CAC12581    185 EERLyfshna------srseygDLYLVNGRg------------------------WTGVFSSSILMSahfpayVSKSKVE 234 Thermoplasma aci...
AAL80149    190 VVGVay---------------mREEFLERKaerdymr-----------lisfpdsDLFVLASSTLELyty-fpVDDVPNA 242 Pyrococcus furio...
NP_125797   208 DPLSk-----------------NYMRIMSFys----------------------aDLFAMMSSTLELytf-ipLDEVENG 247 Pyrococcus abyss...
Feature 1               
1TE5_A      242 EWVLWWGG 249 Pseudomonas aeruginosa PAO1
YP_256446   235 RLTKLGER 242 Sulfolobus acidocaldarius DSM 639
BAB66938    223 EFGELKEL 230 Sulfolobus tokodaii str. 7
BAD85224    247 TAISISGD 254 Thermococcus kodakarensis KOD1
ZP_01029170 273 QMIVASNR 280 Bifidobacterium adolescentis
YP_447870   218 TVFALKDG 225 Methanosphaera stadtmanae DSM 3091
YP_513500   251 KMVVASHG 258 Francisella tularensis subsp. holarctica
CAC12581    235 NDTVMDLP 242 Thermoplasma acidophilum
AAL80149    243 TLFALDVN 250 Pyrococcus furiosus DSM 3638
NP_125797   248 TAFVVSVN 255 Pyrococcus abyssi GE5

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