Conserved Protein Domain Family
TypA_BipA

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cd01891: TypA_BipA 
Tyrosine phosphorylated protein A (TypA)/BipA family belongs to ribosome-binding GTPases
BipA is a protein belonging to the ribosome-binding family of GTPases and is widely distributed in bacteria and plants. BipA was originally described as a protein that is induced in Salmonella typhimurium after exposure to bactericidal/permeability-inducing protein (a cationic antimicrobial protein produced by neutrophils), and has since been identified in E. coli as well. The properties thus far described for BipA are related to its role in the process of pathogenesis by enteropathogenic E. coli. It appears to be involved in the regulation of several processes important for infection, including rearrangements of the cytoskeleton of the host, bacterial resistance to host defense peptides, flagellum-mediated cell motility, and expression of K5 capsular genes. It has been proposed that BipA may utilize a novel mechanism to regulate the expression of target genes. In addition, BipA from enteropathogenic E. coli has been shown to be phosphorylated on a tyrosine residue, while BipA from Salmonella and from E. coli K12 strains is not phosphorylated under the conditions assayed. The phosphorylation apparently modifies the rate of nucleotide hydrolysis, with the phosphorylated form showing greatly increased GTPase activity.
Statistics
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PSSM-Id: 206678
Aligned: 29 rows
Threshold Bit Score: 301.05
Created: 6-Jan-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:Based on sequence similarity with elongation factor EF-Tu.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                ######                                                               
P32132      4 KLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRaetqERVMDSNDLEKERGITILAKNTAIKWn-----------DYRINI 72  Escherichia coli
NP_967154   7 KIRNIAIIAHVDHGKTTLVDHLIKQAGTFRDNehveERLMDSMDLERERGITIAAKNASFMYk-----------DIKVNI 75  Bdellovibrio bacte...
CAI26875   30 SICNLAIIAHVDHGKTTLLDAMLKQSGTFRENqdvaERVMDNNDLERERGITILAKCTSITWq-----------GKKINI 98  Ehrlichia ruminant...
NP_335645   2 PFRNVAIVAHVDHGKTTLVDAMLRQSGALRERgelqERVMDTGDLEREKGITILAKNTAVHRhhp------dgtVTVINV 75  Mycobacterium tube...
YP_056676   6 DLRNIAIVAHVDHGKTTLVDAMLWQSGAFREGaeveKRVMDSMDLEREKGITILAKNTAVKHvms------dgeEITLNI 79  Propionibacterium ...
NP_696544   6 DIRNVAIVAHVDHGKTTLVNAMLQQSHVFSEReevpDRVMDSNDLEREKGITILAKNTAVEYtgplaakyghpeGITLNI 85  Bifidobacterium lo...
NP_787723   5 DIRNIAVVAHVDHGKTTLISAMLQQTSDSTTAe---DRVLDSHELEREKGITILAKNTAVTYkss-------grSVTLNI 74  Tropheryma whipple...
YP_011444   9 RLRNVAIIAHVDHGKTTLVDALFRQSGVFRADqqvdDRVMDRMDLERERGITIAAKNCAVTWg-----------DTKINI 77  Desulfovibrio vulg...
XP_816844  29 DLRNIAVIAHVDHGKTTLVDTMLRQSGTLVEAr---NRVMDSKDQEKERGITILAKNTAIFLpkrt----asqsERRINI 101 Trypanosoma cruzi ...
YP_265590   4 NIRNITIIAHVDHGKTTMIDNLMKQSGSFRENevvdERLMDSGELEKERGITILAKPASIDWq-----------GTRVNI 72  Candidatus Pelagib...
Feature 1                                                            ## #                     
P32132     73 VDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAygLKPIVVINKVDRPgARPDWVVDQVFDLFVNLD 152 Escherichia coli
NP_967154  76 VDTPGHSDFGGEVERILNMVDGCILLCDASEGPLPQTRFVLKKALEggKKVIVCINKIDRSdARIQEVHNELFDLFIDLD 155 Bdellovibrio bacte...
CAI26875   99 IDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKagLLPIVIINKVDRPdSRIDEVLDEVYELFMNLD 178 Ehrlichia ruminant...
NP_335645  76 IDTPGHADFGGEVERGLSMVDGVLLLVDASEGPLPQTRFVLRKALAahLPVILVVNKTDRPdARIAEVVDASHDLLLDVA 155 Mycobacterium tube...
YP_056676  80 IDTPGHADFGGEVERGLEMVDGVILLVDASEGPLPQTRFVLRKALAkkLPLILVLNKVDRSdARIDEVVEETYDLFMDLS 159 Propionibacterium ...
NP_696544  86 IDTPGHADFGGEVERGISMVDGVVLLVDASEGPLPQTRFVLRKALEakLPVILCVNKVDRPdARIEEVVGETSDLLLGLA 165 Bifidobacterium lo...
NP_787723  75 VDTPGHADFGGEVERGMSMVDGVVVLVDASEGPLPQTRFVLKKALLkkLPIVLAVNKTDRSdARIDDVVSEFQDLLISLA 154 Tropheryma whipple...
YP_011444  78 IDTPGHADFGGEVERALSMADGAVLLVDSSEGPLPQTRFVLRKTLEagLKVIVVINKIDRKdARVQEVLNEVYDLFIDLD 157 Desulfovibrio vulg...
XP_816844 102 VDTPGHLDFSGEVERALQMVEGIVLLVDAKEGVRPGTRYVLRKALSlnLKPIVCLNKIDRDdTNIKKTEDAMQDLFLETA 181 Trypanosoma cruzi ...
YP_265590  73 IDTPGHRDFAAEVERVLSMADGALLLIDSAEGVMPQTKFVLAKALKqgLKPIVVINKLDKAdQRANEVLDETFDLFVSLD 152 Candidatus Pelagib...
Feature 1                            ###                                  
P32132    153 ATDEQ----------LDFPIVYASALNGIAGLDhed-----maeDMTPLYQAIVDHVPAP 197 Escherichia coli
NP_967154 156 ATEEQ----------CDFHTVYAIAREGMATLDpav-----ntgSLEVLYDAIVNLVPPP 200 Bdellovibrio bacteriovorus HD100
CAI26875  179 ATDEQ----------LDFPILYASGRSGWCVKSlsd-----nreNLVPLFDAVIQHVKPI 223 Ehrlichia ruminantium str. Welgevonden
NP_335645 156 SDLDDeaaaa-aehaLGLPTLYASGRAGVASTTappdgqvpdgtNLDPLFEVLEKHVPPP 214 Mycobacterium tuberculosis CDC1551
YP_056676 160 DDDDAs--------lLDVPVVYASAKAGRASLNkpgdgelpdspDLQPLFDCILENIPAP 211 Propionibacterium acnes KPA171202
NP_696544 166 DDVQHegidldldqlLEMPVIYCAAKAGYASVNqpadgglpdndNLEPLFETIISTIPAP 225 Bifidobacterium longum NCC2705
NP_787723 155 EEINDpal----ysiLDVPIVYVSGRAGRASINkpdngqlpdrnNLDDLFEKIISYIPAP 210 Tropheryma whipplei str. Twist
YP_011444 158 ATEEQ----------LEFPVLYAIGRDGVAMRSldd-----preSLAPLFETLVSVIPGP 202 Desulfovibrio vulgaris subsp. vulgaris...
XP_816844 182 ENEEQ----------LEIHFMFGSGRDGYMNDTpkk------ggTLDPLFEKIFSTVPAP 225 Trypanosoma cruzi strain CL Brener
YP_265590 153 ANEEQ----------LDFPVMYASGRSGWADKEvdg-----preNLHPLLDLIIEHVKPA 197 Candidatus Pelagibacter ubique HTCC1062

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