1TUI,1D2E,1EFC,1EFU,1EXM


Conserved Protein Domain Family
EF_Tu

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cd01884: EF_Tu 
Click on image for an interactive view with Cn3D
Elongation Factor Tu (EF-Tu) GTP-binding proteins
EF-Tu subfamily. This subfamily includes orthologs of translation elongation factor EF-Tu in bacteria, mitochondria, and chloroplasts. It is one of several GTP-binding translation factors found in the larger family of GTP-binding elongation factors. The eukaryotic counterpart, eukaryotic translation elongation factor 1 (eEF-1 alpha), is excluded from this family. EF-Tu is one of the most abundant proteins in bacteria, as well as, one of the most highly conserved, and in a number of species the gene is duplicated with identical function. When bound to GTP, EF-Tu can form a complex with any (correctly) aminoacylated tRNA except those for initiation and for selenocysteine, in which case EF-Tu is replaced by other factors. Transfer RNA is carried to the ribosome in these complexes for protein translation.
Statistics
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PSSM-Id: 206671
Aligned: 56 rows
Threshold Bit Score: 312.596
Created: 6-Jan-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Structure:1TUI: Thermus aquaticus EF-Tu binds GDP and Mg2+, defined using 3.5 A contacts
  • Citation:PMID 1542116

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   ######                    #                                          
1TUI_B        10 PHVNVGTIGHVDHGKTTLTAALTYVAAAEnpnvevkdYGDIDKAPEERARGITINTAHVEYETaKRHYSHVDCPGHADYI 89  Thermus aquaticus
1D2E_D         2 PHVNVGTIGHVDHGKTTLTAAITKILAEGggak-fkkYEEIDNAPEERARGITINAAHVEYSTaARHYAHTDCPGHADYV 80  cow
AAB00499      56 PHVNVGTIGHVDHGKTTLTAAITKILAEGggak-fkkYEEIDNAPEERARGITINAAHVEYSTaARHYAHTDCPGHADYV 134 human
AAF59240      56 PHCNVGTIGHVDHGKTTLTAAITRIQSQKglae-ylsYDQIDRAPEEKARGITINACHIGYSTtERTYAHTDCPGHADYI 134 fruit fly
AAL13722      81 PHCNVGTIGHVDHGKTTLTAAITKVLADKqlae-skkYNEIDNAPEEKARGITINVAHVEYQTeTRHYGHTDCPGHADYI 159 fruit fly
H87753        44 INVNVGTIGHIDHGKTTLTSAITRVQAKKgfak-hikFDEIDKGKEEKKRGITINVAHIGYESpLRRYSHTDCPGHSDFI 122 nematode
AAH64270      55 PHVNIGTIGHVDHGKTTLTAAITKILAEAggaq-fkkYEEIDNAPEEKARGITINASHVEYATaNRHYAHTDCPGHADYV 133 western clawed ...
AAW24551      49 PHMNIGTIGHVDHGKTTLTAAITKVLAEKnssv-yrsYEEIDAAPEERRRGITINAAVVDYTTsNRHYAHTDCPGHADYI 127 Schistosoma jap...
NP_001013523  51 PHLNIGTIGHVDHGKTTLTAAITKVLAEAggan-yksYEDIDNAPEEKARGITINASHVEYTTaNRHYAHTDCPGHADYV 129 zebrafish
EAN30405      11 PHVNIGTIGHVDHGKTTLTSAITSVLKLKgcteksysYEDIDSTKEEKKRGITINTTHVEYESdLRHYAHIDCPGHADYI 90  Theileria parva
Feature 1                                                      ## #                              
1TUI_B        90 KNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVpYIVVFMNKVDmvdDPELLDLVEMEVRDLLnqyeFPGDEVP 169 Thermus aquaticus
1D2E_D        81 KNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVeHVVVYVNKADavqDSEMVELVELEIRELLtefgYKGEETP 160 cow
AAB00499     135 KNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVeHVVVYVNKADavqDSEMVELVELEIRELLtefgYKGEETP 214 human
AAF59240     135 KNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIqRIIVFINKADl-vDQEVLELVEIEMREMLsdfgFDGVNSP 213 fruit fly
AAL13722     160 KNMITGTAQMDGAILVVAATDGAMPQTREHMLLAKQIGIdHIVVFINKVDa-aDEEMVDLVEMEIRELLtemgYDGDKIP 238 fruit fly
H87753       123 KNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAKQVGVkNMAIFINKADl-vEEDDLDLVEMEARELLslhgFNGDATP 201 nematode
AAH64270     134 KNMITGTSQMDGCILVVAATDGQMPQTREHLLLAKQIGVtNIVVYINKADavdDKEMLDLVELEVRELLtefgYDGENTP 213 western clawed ...
AAW24551     128 KNMITGANQMECAILVVAATDGTMPQTREHLLLAKQIGIeKLVVFINKADa-aDPEMLELVELEVRDTLkqygFDGDNTS 206 Schistosoma jap...
NP_001013523 130 KNMITGTAQMDGCILVVAATDGQMPQTREHLLLARQIGVqHVVVYINKADavdDKEMLDLVELEIRELLtefgYDGENTP 209 zebrafish
EAN30405      91 KNMIIGAVQMDGAILVISLEDGPMPQTIEHLLLAKQIGIkKLVVFLNKEDkvdDEEIIFFIKEETKSMLdkygFDSTLTP 170 Theileria parva
Feature 1            ###                                     
1TUI_B       170 VIRGSALLALEemhknpktkrgeneWVDKIWELLDAIDEYIPTP 213 Thermus aquaticus
1D2E_D       161 IIVGSALCALEqrd--------pelGLKSVQKLLDAVDTYIPVP 196 cow
AAB00499     215 VIVGSALCALEgrd--------pelGLKSVQKLLDAVDTYIPVP 250 human
AAF59240     214 VICGSALLALRedk--------sefGVPSIEKLLEQCDSYIPTP 249 fruit fly
AAL13722     239 VVKGSALCALEdks--------peiGKEAILKLLQEVDSFIPTP 274 fruit fly
H87753       202 VIRGSALSALEg------------qDISCIERLIDALDSLPEPD 233 nematode
AAH64270     214 IITGSALCALEnrn--------pdiGLNSIMTLLDAVDTYIPVP 249 western clawed frog
AAW24551     207 VVSGSALCALEnrd--------hklGKEKIEELLDVIDSVPLPK 242 Schistosoma japonicum
NP_001013523 210 VVVGSALCALEnkk--------pelGVNSIMKLLEVIDGHIPLP 245 zebrafish
EAN30405     171 LITGSALKALEeikllke-idlnnkWISKVINLIDTVDSYIEKP 213 Theileria parva

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