Conserved Protein Domain Family
NGP_1

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cd01858: NGP_1 
A novel nucleolar GTP-binding protein, circularly permuted subfamily of the Ras GTPases.
Autoantigen NGP-1 (Nucleolar G-protein gene 1) has been shown to localize in the nucleolus and nucleolar organizers in all cell types analyzed, which is indicative of a function in ribosomal assembly. NGP-1 and its homologs show a circular permutation of the GTPase signature motifs so that the C-terminal strands 5, 6, and 7 (strand 6 contains the G4 box with NKXD motif) are relocated to the N terminus.
Statistics
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PSSM-Id: 206751
Aligned: 33 rows
Threshold Bit Score: 271.094
Created: 6-Jan-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:based on structure of B. Subtilis Ylqf Gtpase

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                   ## ##                         ### 
Q13823    209 ELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKekPWKHLIFVLNKCDLVPTWATKRWVAVLSQDY-PTLAFHASLTN 287 human
XP_626422 236 ELYKVIDSSDIIIHVLDSRDPEGTRCKYLEEYISKeyQNKHILFVLNKVDLIPKWVATKWISFYGSIR-PTIAFHSSITN 314 Cryptosporidium pa...
XP_648675 194 ELWKVVDSSDVVIEVLDARDPMGTRSKHVEEHIKKhmKHKHIVLVLNKCDLVPTWATARWVKVLSKEF-PTIAFHASMEN 272 Entamoeba histolyt...
EFJ37752  193 ELYKVIDSSDVVVQVLDARDPAGTRCYHLEKHLREncKHKHLIFLLNKCDLVPAWATRGWLHVLSREY-PTLAFHASVTN 271 Selaginella moelle...
EER15085  221 ELYKVVDSSDVILEVIDARDPMGTRCQKLEREIRRtrPNKHIVLILNKCDLIPTWATKRWVQVLSKEF-PTLAFHASVTN 299 Perkinsus marinus ...
EDP03872  216 ELYKVLDSSDVIVQVLDARDPNGTRCNFLEQHIRKhlRHKHIILLLNKCDLVPSWVTKRWLHYLSRDF-PVLAFHASITN 294 Chlamydomonas rein...
CAK67681  213 ELYKVIDSSDVLVCILDARDPMGTRSYHLENHIKKncPHKHLVLLINKCDLIPTWLTSRWVQYLSKDY-PTVAYHANVNK 291 Paramecium tetraur...
EAY15525  178 EVLKVIDSSDVIVEVLDARDPMGTRSKRMEDFMVKetPHKHLVFLINKCDLVPKWVVEKAVRRLLRER-PTIAYRASTTL 256 Trichomonas vagina...
CAD27137  162 ELYKVLDSSDVIIHVLDARDPMGTMCEKIASYIKEeaPHKHLMYVLNKVDLIPTGVTAKWLRHFSRLHpTIAYHSNSITN 241 Encephalitozoon cu...
EEE20662  240 ELYKVIDSSDVIVQVVDARDPLGTRCFRVEKYLRShkQSKHMILVLNKIDLIPSQVARIWVRRFSKELpTLPFQAKKQEK 319 Toxoplasma gondii GT1
Feature 1                                     #######                                      # 
Q13823    288 PFGKGAFIQLLRQFgkl-htDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGV 365 human
XP_626422 315 SFGKRTLFHVLRQYasl-lsDKKHVSVGFIGYPNVGKSSIINTLRGSKVCSVAPIAGETKIWQYIHLTHRIYLIDCPGI 392 Cryptosporidium parvum
XP_648675 273 PFGRGSLMSLLRQYanlmveGDRQISVGFIGYPNSGKSSVINTLRSQKVCKVAPVAGETKVWQYITLLKNIYLIDCPGV 351 Entamoeba histolyti...
EFJ37752  272 PFGKGSLLSLLRQLarl-ksDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPLPGETKVWQYITLTKRIFLIDCPGV 349 Selaginella moellen...
EER15085  300 PFGKSALFQLLRQFaql-lkERKHVSIGMIGYPNVGKSSVINALKRKKVCKAAPVPGETKVWQYVALTKRIYLIDCPGI 377 Perkinsus marinus A...
EDP03872  295 PFGKGALLSLLRQLarl-rsDKQAISVGFVGYPNVGKSSVINTLRTKKVCKAAPIPGETKVWQYITLMKRIFCIDCPGV 372 Chlamydomonas reinh...
CAK67681  292 AFGKGPFINLLRQFdkf-hrDKQTISIGFVGYPNVGKSSVINSLKKRKVCKAAPVPGETRVWQYVALTKRIYLIDCPGV 369 Paramecium tetraure...
EAY15525  257 CFGLDQLTSLLKQFqvl-hsDHAHTCVGFVGYPNVGKSSVINSLRREEVCPVAPIPGETKVWRYITLTKKIYLIDCPGH 334 Trichomonas vaginal...
CAD27137  242 NYGKANLISLLKQLsk--lyKKSHLSVGFVGYPNTGKSSIINTLRNKEVCKVAPIPGETKVWQYITLTRGIYLIDCPGI 318 Encephalitozoon cun...
EEE20662  320 AAGRLQLFQLLRQYvql-msDRKHVSVGFIGYPNVGKSSIINALRSKQVCRAAPIPGETRVWQYVALTKRLYLIDCPGI 397 Toxoplasma gondii GT1

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