1YGE,1F8N,1FGQ,1FGR,1FGM,1ROV,1RRL


Conserved Protein Domain Family
PLAT_LH2
?
cd01751: PLAT_LH2 
Click on image for an interactive view with Cn3D
PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Links
?
Statistics
?
PSSM-Id: 238849
Aligned: 25 rows
Threshold Bit Score: 141.29
Created: 13-Sep-2004
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
1YGE        6 HKIKGTVVLmpknelevnpdg--savdnlnaflgRSVSLQLISATkadahgkgKVGKDTFLEGIntslptlgageSAFNI 83   soybean
P38418     73 IKVKGYITAqeeflegitws---rglddiadirgRSLLVELISAKtd-----qRITVEDYAQRVwae-----apdEKYEC 139  thale cress
CAA65268   70 TGVKAVVTVqkqvnlnlsr-----glddigdllgKSLLLWIVAAEldhktgieKPGIRAYAHRGrdv-----dgdTHYEA 139  potato
XP_464447  83 LTVTATVTVqppigvvyaar----giddltdligKTLLLELVSSEldprtgkeKETVSAFAHRTmk--------qDTYEA 150  Japanese rice
T11578     70 VKVKATISVqptiggifssla--idaddltdllgKSLFVELLSAEldpktkleKKPIQDFAHRThrs-----pkeVRYLA 142  cowpea
BAB84352   66 NGVTAVVTVrppinpltagg---qviddvedlfsKSLQLELVSAKde-----nKPTISGNAKIKgvvv---kdceVQYEA 134  rough lemon
Q8GSM2     70 LTVTAIVTAqvptsvyvar-----glddiqdlfgKTLLLELVSSEldpktgreRERVKGFAHMTlk--------eGTYEA 136  Hordeum vulgare
P93184     86 TEMKATVTVhmskaagvr-------dflydlilkTWLHVDLVSSEldpqtgqeREPISGAVKHSgrvd----dewDMYEA 154  Hordeum vulgare
CAC01439   76 YTLSATVTVslkqddstp-------qkvadmvnrDWLFLDFFSSHieg--mhtEPQLARYSHMDgk-------gsFIYEA 139  rice
Q8GSM3     77 VEMKATVSVhmksfwwsdekkerardwaydlilgSWLTLELVSSEldpktgqeHDVISGKLKHSrete----kdyDLYEA 152  Hordeum vulgare

1YGE       84 HFEWDGSMGIPGAFYIKNYMQvEFFLKSLTLEAIsn-----qGTIRFVCNSWVYNtklyKSVRIFFAN 146  soybean
P38418    140 EFEMPEDFGPVGAIKIQNQYHrQLFLKGVELKLPg-------GSITFTCESWVAPksvdPTKRIFFSD 200  thale cress
CAA65268  140 DFVIPQDFGEVGAILIENEHHkEMYVKNIVIDGFv------hGKVEITCNSWVHSkfdnPDKRIFFTN 201  potato
XP_464447 151 EFAVPATFGPVGAVLVENEHHrEMFVKEICLVTGad----dsSAVTFDCNSWVHSkfdnPDRRIFFTV 214  Japanese rice
T11578    143 EFDVPVDFGEIGAILVENEHRrEMFIKEIILDGFe------lGPVRFTCESWLHPkkdnPVKRVFFPD 204  cowpea
BAB84352  135 EFQVPVDFGEIGAILVVNEHAlEMYLKDIVLDGLp------sGLVTITCESWVQPnt-sKDPRIFFTN 195  rough lemon
Q8GSM2    137 KMSVPASFGPVGAVLVENEHHrEMFIKDIKLITGgd----esTAITFDVASWVHSkfddPEPRAFFTV 200  Hordeum vulgare
P93184    155 TFKVPASFGPIGAVQVTNYHHsEMLLGDIEVFPTgq----eeSAVTFHCKSWIDPshctPDKRVFFPA 218  Hordeum vulgare
CAC01439  140 SFSIPSSLDAVGAVQVVNRYSsEVYISDIDVHLCggr--hqwTDITFHCNSWIDYn--pNDQRFFFPL 203  rice
Q8GSM3    153 IFTCRHRLAPSGAVRLVNYHHtEMLLGEVKIFPAgedptkssAVTLFHCQSWIDPshcsPDKRTFFPV 220  Hordeum vulgare
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap