Conserved Protein Domain Family
AcnA_Bact_Swivel

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cd01579: AcnA_Bact_Swivel 
Bacterial Aconitase-like swivel domain. Aconitase (aconitate hydratase or citrate hydrolyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediate product during the course of the reaction. This is the aconitase-like swivel domain, which is believed to undergo swivelling conformational change in the enzyme mechanism. This distinct subfamily is found only in bacteria and archea. Its exact characteristics are not known.
Statistics
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PSSM-Id: 238811
Aligned: 6 rows
Threshold Bit Score: 214.609
Created: 16-Jul-2004
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
substrate
Feature 1:substrate binding site [chemical binding site]
Evidence:
  • Comment:These residues participate in the active site of the catalytic domain.
  • Comment:Based on related sequences with known structures.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                        ###            
NP_214222   480 IVEDNITTDHIMPAGAKILPLRSNIYAISEYVYHYVDPEFVPRmkklkekgkAGIIIGgeNYGQGSSREHAAlAPRFLGV 559 Aquifex aeolicus...
NP_281140   481 KMQDNITTDHIIPATSDILKFRSNIERLSEFTLSRIDDTFAERaka----adSGVLVAgeNYGQGSSREHAAmCPMFLGV 556 Halobacterium sp...
BAC16791     84 RLEDDITTDHIMPAGAKVLPLRSNLPAISEFVFHMVDETFPSRaka----sgGGFIVAghNYGQGSSREHAAlAPRYLGV 159 Acidithiobacillu...
NP_927033   471 KLGDNISTDHIMPAGAKVLPLRSNIPAIAEFVFMRVDPTFPERara----agPSLVVGgsNYGQGSSREHAAlAPMYLGV 546 Gloeobacter viol...
ZP_00181637 472 KVGDNITTDHISPAGARYLPLRSNIPALAEHAFEGVDPTFARRake----agQGIIVGgqNYGQGSSREHAAlCPMYLGI 547 Moorella thermoa...
ZP_00188258 475 VVGDDISTGDLAPDGVEVMAYRSNIPEIARFTFRRFDPEYHEKaqr----maPGFIVGghNYGQGSSREHAAlAPLHLGI 550 Rubrobacter xyla...
Feature 1                                                    
NP_214222   560 rAVIAKSFARIHHANLVNFgvVPLEFknkedydkfslGDEIEIPN 604 Aquifex aeolicus VF5
NP_281140   557 eSVLAQSFARIHKANLFNFgiLPLNIdeety-arieqGDDVEVVD 600 Halobacterium sp. NRC-1
BAC16791    160 rGVLVQSFARIHLANLINFgiLPLTFvhaedyakvqaGDQLGLDL 204 Acidithiobacillus thiooxidans
NP_927033   547 rAVIVKSFARIHRANLINFgiLPLTFadeadhdgvdqGDQLRLEG 591 Gloeobacter violaceus PCC 7421
ZP_00181637 548 kAVIAKSFARIHRSNLVNFgiLPLTFadpddydriaaGDTLAIDL 592 Moorella thermoacetica ATCC 39073
ZP_00188258 551 rAVLAKSFARIHRRNLISQgiLPLRFrdeddyerfeqGQRWELPE 595 Rubrobacter xylanophilus DSM 9941

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