Conserved Protein Domain Family
RHOD_Pyr_redox
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cd01524: RHOD_Pyr_redox 
Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Links
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Statistics
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PSSM-Id: 238782
Aligned: 12 rows
Threshold Bit Score: 130.849
Created: 29-Jun-2004
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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active site
Feature 1:active site residue [active site]
Evidence:
  • Comment:active site is based on homology to other members of the Rhodanese Homology Domain superfamily
Scroll to Sequence Alignment Display
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1                                                                      #                
NP_233033   475 IHFDEIDnlt----deQVLLDVRNpMELqn--mgYLPGAINIPVDQLRQHMNELPkdKEIVIYCQVGLRGNVAYRQLVNN 548  Vibrio cholerae...
NP_569193   457 MTPTELIerqa-sgeqLQIIDTRSkKQYei---sCVKGAIHIPLAEIRDRVAELDknVTTITYCNKGVTGNAAQNILLNE 532  Listeria innocua
ZP_00063377 448 IQYNELEnyr---rdgYLLIDVRSsQEIra--mgLINGFINIPLEKIRDRINQIPkdTGIIVSCATGQRSYTAERIFINN 522  Leuconostoc mes...
NP_266942   451 IQWHELAael---akgKVLLDVRNpNELak---gKFKNSQNIPLDDLRERLNELDkkNEYIVSCQSGLRSYNAERILKQE 524  Lactococcus lac...
NP_830581   457 VQWHEIDhiv---engGYLIDVREpNELkq---gMIKGSINIPLDELRDRLDEVPmdKEIYITCQLGMRGYVAARMLMEK 530  Bacillus cereus...
NP_602703   455 VFMEDLEnyn---ekeTIILDVREkLELis---gKLNNSINIPLSELRKRYTELPkdKEIWTYCAVGLRGYIASRFLTQK 528  Fusobacterium n...
NP_406495   456 KQWHEVDafm---adgGIIIDVRDeAEFis---gSIKTAVNIPLSELRQKLALIPqdKKILVTCQVGLRGYIAARILSQY 529  Yersinia pestis...
NP_940086   446 VQWHELDaqi---adgWTLVDVRTaGEFaa---gNIPGAINIPVDELREHLDELQg-KNVLVHCQVGLRGHVAATLLTNS 518  Corynebacterium...
ZP_00097094 455 LVWDDLNkid----eeYTFVDVRTkIEFak---gHVEGAINIPVDDLRQRIQELDpgKLIVVYCEVGLRGYFAERILTQK 527  Desulfitobacter...
NP_811347   451 VQPVYWRqlrdiemenNFLLDVRTpDEFsl---nTLPGAVNIPLDELRDRLDELPkdKMIYTFCAVGLRGYLAYRILVQH 527  Bacteroides the...
NP_904513   577 MKPLHWRemkevdpnrVTLIDARPrQAYev---eHIPGAISMPVEEIRARIGEIPhdKPIYVYCAVGMRGYFASNILRQC 653  Porphyromonas g...
NP_868631   463 DEIESFRdsdd-sldeVQVVDVRGaGEIektplrEASGAIHIPVDELRERLSELDrsKPTVVSCAVGVRGHIAARILRQN 541  Pirellula sp. 1

Feature 1                        
NP_233033   549 GF-KARNLIGGYRTYKF 564  Vibrio cholerae O1 biovar eltor str. N16961
NP_569193   533 GFkEVYNLSGGNKNYQI 549  Listeria innocua
ZP_00063377 523 GFrNVKNLDGAFSLYQL 539  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
NP_266942   525 GY-KVKNLDGAFGLYSK 540  Lactococcus lactis subsp. lactis Il1403
NP_830581   531 GY-KVKNVDGGFKLYGT 546  Bacillus cereus ATCC 14579
NP_602703   529 GY-KVKNLAGGIKIEEK 544  Fusobacterium nucleatum subsp. nucleatum ATCC 25586
NP_406495   530 GY-TVANLDGGYLTFNY 545  Yersinia pestis CO92
NP_940086   519 GI-NAANLDGGYLTWKT 534  Corynebacterium diphtheriae NCTC 13129
ZP_00097094 528 GY-RVLNLTGGYTTYSV 543  Desulfitobacterium hafniense
NP_811347   528 GFeKVRNLSGGLKTYHA 544  Bacteroides thetaiotaomicron VPI-5482
NP_904513   654 GFsNVRNLIGGYRLYST 670  Porphyromonas gingivalis W83
NP_868631   542 GF-DVQNLSGGATVRNR 557  Pirellula sp. 1

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