Conserved Protein Domain Family
E1_ThiF_like

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cd01487: E1_ThiF_like 
E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Statistics
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PSSM-Id: 238764
Aligned: 8 rows
Threshold Bit Score: 246.139
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative ATPputative
Feature 1:putative ATP binding site [chemical binding site]
Evidence:
  • Comment:binding site is based on homology to other members of the superfamily

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            # # #                   # #        #           #                           
YP_011305    29 TVGIAGAGGLGSNCAVLLARSGvGRFVLVDHDVVEPSNLNRQHYlaadVGRPKAEALADVLRAINPAVDLVVHvqqledg 108 Desulfovibrio vu...
ZP_00062980  34 HVTIAGAGGLGSNIAIALARAGvGHLTLIDFDAVELSNLNRQQFklsqINVPKVIALKQNILEFNPFITISTIqervtsq 113 Leuconostoc mese...
NP_349525    85 SVGIAGLGGLGSNAAVSLARIGvGRLVLVDFDVVEPSNLNRQHYfirhIGMKKTEALKEIISQCNPFVKVDVVdtfingn 164 Clostridium acet...
ZP_00061448  24 KVGIAGAGGLGSNCALHLVRSGfKNLKIVDFDVVEPSNLNRQFFfldqLGRPKVLALKENLARINPDVMIEAIqqkvdrn 103 Clostridium ther...
NP_282196    86 RVAVCGLGGLGSHIAINLARSGvGYLKLIDFDVIEPSNLNRQAYrvsdLGKFKTEALKEQISEINPYISVEICtlkided 165 Campylobacter je...
ZP_00144490  24 KVCILGLGGLGSNVAVLLARAGiGYLKLIDFDVVEASNLNRQQYrishIDMKKTEAMKTIIREINPFVEVDILdikvdrk 103 Fusobacterium nu...
NP_562518    85 KVLIAGCGGLGSNIAISLGRIGvGSISLVDFDIVEPSNLNRQQYyiedIGEFKVTALKRNLIRINPFIKIEALnlkl-se 163 Clostridium perf...
NP_623997    24 KILLIGCGGLGSNVAVMLIRSGiKNLTIVDFDEVDILNLNRQNYflhqVGEKKVLALKDTLFKINPHANIAAKnikides 103 Thermoanaerobact...
Feature 1                     #     #                                                           
YP_011305   109 niIGIFGGCDVVVEAVDDaaTKRMLAETLmga--grPVVCASGmggWGGPPMRERhlgesmvvvgdf--tnevgpglppl 184 Desulfovibrio vu...
ZP_00062980 114 nvEALFGDSDIICEAFDDphSKAVLLGSSreifpnkPLVMGNGl-aGIHSPNNIKtrqqsenvyicg--dnisagveglm 190 Leuconostoc mese...
NP_349525   165 naQEIFKDVDIIVEAFDNpvCKAELINSVltkmngkKVIGASGm-aGYFSSNSIVtkkinknfyivgdgeneaapgcglm 243 Clostridium acet...
ZP_00061448 104 naKQLFDDCDAVVEAFDKveCKTMMAEAFass--gkFFVCASGl-aGWGNSDEIRirkvhdrfyivgdfvtgvkegippi 180 Clostridium ther...
NP_282196   166 nlESLFKDIDIVCEAFDSaiAKAMIAQNFhrfykdgILICASGl-aGYGDSNSIQtrkiaknfyvcgdlvngaklgnglm 244 Campylobacter je...
ZP_00144490 104 niYSIVGDIEIVVEAFDKaeIKAMLMEELltn-tnkIVVSASGm-aGLGSANEIVtkkikdnfylvgdnysdyeeylgim 181 Fusobacterium nu...
NP_562518   164 dnMGILQGADIIIEAFDNpdYKALLANYVlgnmkdkFLISSSGm-aGFYDSNLIKtkqitdkfyicgdlvneakegcglm 242 Clostridium perf...
NP_623997   104 nlDELIPQHDIVVEAVDNefTKTLIFKKAqkh--nkKVVLASGv-aGFGDCENIKikrgknfsivgd--fvtsinekkpl 178 Thermoanaerobact...
Feature 1                       
YP_011305   185 APRVVMAAAMQADAVL 200 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
ZP_00062980 191 APRVLVCAGHQANVIL 206 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
NP_349525   244 APRVNIAANHEANQVL 259 Clostridium acetobutylicum ATCC 824
ZP_00061448 181 SPRVNIAAAKQADLIL 196 Clostridium thermocellum ATCC 27405
NP_282196   245 APRVNICAGHQSNLVL 260 Campylobacter jejuni subsp. jejuni NCTC 11168
ZP_00144490 182 STRVMICAAHQANVVL 197 Fusobacterium nucleatum subsp. vincentii ATCC 49256
NP_562518   243 APRVAICANHMANLVI 258 Clostridium perfringens str. 13
NP_623997   179 APKVMAVAAIQADEVL 194 Thermoanaerobacter tengcongensis

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