1JW9,1JWB,1NGV,1NGV


Conserved Protein Domain Family
E1_enzyme_family

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cd01483: E1_enzyme_family 
Click on image for an interactive view with Cn3D
Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Statistics
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PSSM-Id: 238760
Aligned: 46 rows
Threshold Bit Score: 76.5381
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
ATP bindingsubstrate
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # # #                             # #        #            #                
1JW9_B        33 RVLIVGLGgLGCAASQYLASAgv----------gNLTLLDFDTVSLSNLQRQtlhsdatVGQPKVESARDALTRInphIA 102  Escherichia coli
1JWB_B        33 RVLIVGLGgLGCAASQYLASAgv----------gNLTLLDFDTVSLSNLQRQtlhsdatVGQPKVESARDALTRInphIA 102  Escherichia coli
ZP_00124342   48 VVGVAGAGgIGGAVALGLARLgv----------rHIKIADPDSFEISNINRQfgasvetVGRNKALVVAELVHRLagdVS 117  Pseudomonas sy...
ZP_00130011  379 RVAVAGLGgVGGEHLVTLARTgf----------gKFTIAEFDEFSPVNVNRQygatvsaFGRAKLDVMLEYAMGVnpfLD 448  Desulfovibrio ...
ZP_00081063   30 RVAVAGAGgVGGIHVLTLARLgv----------gCFTIADHDSFDVVNISRQfgafhstLNRNKAQVLAEMVKDInpnAE 99   Geobacter meta...
ZP_00026591   43 RVSVVGAGgTGSALLPNLARLhhamlelghpggiDCTVYDDDTVSETNVGRQgfy-pvdVGQYKATLIVNRLNNLm-gTR 120  Wautersia meta...
NP_216854     44 RVAIAGMGgVGGIDMVALARMgi----------gKFTIADPDVFEIRNSNRQygamrstNGQAKAEVMRNIVHDInpeAE 113  Mycobacterium ...
NP_478208     22 NFVLVGVGgTGGFLAEDLCRIilqlqr--trkeiNFAIVDGDTVELKNISRQnyq-qaeIGLPKAETLAARCSAKy-gIE 97   Nostoc sp. PCC...
NP_982107     16 HIVLVGAGgNGGLILQHIAQMmsif-----qldgEIVVADPDTVEEKNLGNQlfi-rpdVGKYKAEVLARRYKAGy-nVP 88   Bacillus cereu...
NP_519778     18 RVVLVGCGgNGSQMLTGLARLnhaira-lghpglAVEVYDPDTVSEANMGRQlfs-padVGHYKAIVHTQRINHFf-gLD 94   Ralstonia sola...
Feature 1                                                  #       #                             
1JW9_B       103 ITPVnallddael-----------------aaliaehdLVLDCtdn--vaVRNQLNAGCfaa-------kvPLVSGAAir 156  Escherichia coli
1JWB_B       103 ITPVnallddael-----------------aaliaehdLVLDCtdn--vaVRNQLNAGCfaa-------kvPLVSGAAir 156  Escherichia coli
ZP_00124342  118 VDVFpegiqkhta-----------------eafvedcdLVLDQmdfysigERYALHRAYrnsarckgllasSVVGWGAni 180  Pseudomonas sy...
ZP_00130011  449 IRKFpsgiseenl-----------------ddfldgvdVVVDGidffafdIRCALFMRAykk-------giPVITAGPmg 504  Desulfovibrio ...
ZP_00081063  100 VRVMeegvtedni-----------------nafldgvdVYVDSidffeidMRRLIFNSCrak-------giYALTAAPlg 155  Geobacter meta...
ZP_00026591  121 WEAHtrrvgsg---------------------drfvcdMVIGCvds--raARKAIVGAMqrg------aggYYLDCGNn- 170  Wautersia meta...
NP_216854    114 IRAFcepigkena-----------------atflegadVLVDGidafeidLRRLLYREAqqr-------giYALGAGPlg 169  Mycobacterium ...
NP_478208     98 ITAVcdwfeedmir---------------taswwntltVIIGCvdn--stARSKIHSVLkinsan-epaslFWLDCGNs- 158  Nostoc sp. PCC...
NP_982107     89 ISXFtsqyiedietmqqlfgnkydllkkqhkddylylpIVIGAvdn--mfSREVFHQFFhqs------dnlLYIDVGN-- 158  Bacillus cereu...
NP_519778     95 WRAQprkyergey-----------------ahpaavpaLFIACvds--aaARQQLDTAIsgr------mntYLLDLGNr- 148  Ralstonia sola...
Feature 1                                                                                     
1JW9_B       157 --meGQITVFTyqdgepcyrclsrlfge----------------------naltcveagvmapligvIGSLQAMEAI 209  Escherichia coli
1JWB_B       157 --meGQITVFTyqdgepcyrclsrlfge----------------------naltcveagvmapligvIGSLQAMEAI 209  Escherichia coli
ZP_00124342  181 ykfdKAGLTLEdfydipeeaqmtpel---------------------------verlvmlqasyqprFPSIPDIFSW 230  Pseudomonas syrin...
ZP_00130011  505 --ysCALLVFMpggmdfikyfdirddmdm---------------------qekllrfalglapralhVRYLDRRFVD 558  Desulfovibrio des...
ZP_00081063  156 --fgATLQVFDpegmsfddyfgiddq--------------------------tpplekiaafaagltPNPYHLSYMD 204  Geobacter metalli...
ZP_00026591  171 ---aDDGQVILgqiggkakerlphvgd-------------------------lypqlldpkgdkadtAPSCSMAEAL 219  Wautersia metalli...
NP_216854    170 --fsTAWVVFDpkgmtfdryfdlsda---------------------------mntvdkfvafiagiAPSATHRRSI 217  Mycobacterium tub...
NP_478208    159 ---nYSGQVVIgthsnfdivqasnnpdkpqfwl-------------hlpspvlvhpelllpqpeelsDNNLSCAEIQ 219  Nostoc sp. PCC 7120
NP_982107    159 ----TAVTVPDnwrevnkrhwtpqqiadyknsgyngqavcgvklngevilsplgdlfpdaftkketaPSQLSCSELA 231  Bacillus cereus A...
NP_519778    149 ---aSDGQVLFgqtpatlqdgavgnarfnppgs------------aplpypyavlpelidtimpeddAPSCGLAEAL 210  Ralstonia solanac...

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