Conserved Protein Domain Family
vWA_F09G8-8_type

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cd01477: vWA_F09G8-8_type 
VWA F09G8.8 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. The members of this subgroup lack the MIDAS motif. This subgroup is found only in C. elegans and the members identified thus far are always found fused to a C-Lectin type domain. Biochemical function thus far has not be attributed to any of the members of this subgroup.
Statistics
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PSSM-Id: 238754
Aligned: 8 rows
Threshold Bit Score: 252.343
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
partial midas
Feature 1:partial midas motif
Evidence:
  • Comment:Metal ion dependent adhesion site is a signature motif of this family and has the form DxsSxS......(T/S)DG

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                               # #                                                   
NP_496256  22 QNAAAYTDPaCPGNIKNLWLDVVVVVDRSMQMTdaqLWQVRQTLTQVFGSDIrig-tgYSDKRSTCVGFVTYNSNATVTA 100 Caenorhabditis ele...
NP_496252  23 NSAAVYADRvCQGDIKNLWLDVVVVVDKSQLMTnaqLWQVRNTITQLFGSSRigptkyPADPRSTCVGVVTYDSDATTNA 102 Caenorhabditis ele...
NP_496744  13 ATTQASTDRnCGSNWNNLWLDIVIVVDNSKGMTnegITEVAANIATTFASGPrig-tdYSDPRSTRLSILTYNSEATVVA 91  Caenorhabditis ele...
NP_499381  24 SQLSSYVDRpCGKDPKHLWLDIVAVVDNSKEMTddgVLSIAGELSSLFSHAEqlg-idPNQPRTTRIGLVTYNEEATVVA 102 Caenorhabditis ele...
NP_496746  36 SPSQAVTDRsCGSDLSRLWLDIVFVVDNSKNMN---LYNVYNTISNLFNPFVqig-tgYDDPRSTRVGFITYNWNATDVA 111 Caenorhabditis ele...
NP_496745  13 SPTLSVSDRrCGTNANKLWLDVVFVIDNCKIGS---MNLVYQTISSLFSKQLqig-tgYDDPRSTRVGFITYNWNATDVA 88  Caenorhabditis ele...
NP_492949  12 SCSANIPEReCGRDLSNLWLDVVAVVDDSKGVTqggLYNIIGTLNSVLQLSKig--trKDNPRTTRLGLVSYNYNETIEA 89  Caenorhabditis ele...
P34393    242 SLYVTLTLD-FYSCIINFQIDIIFVIDVSEGMGqggLMMVKAEINTLVGQMSl----dPNIQKHVQVGLIKYSDKAEVVF 316 Caenorhabditis ele...
Feature 1                                                                                     
NP_496256 101 ELDia----kSFPDIYNIIqg----sLVDVAStn-aSSLGEGLLAAQRVlnsgrqrtnRYNVKQVILAFAADfqdefsnl 171 Caenorhabditis ele...
NP_496252 103 QLDgp----hSFTDLYNVVqg----sLNNVDStn-sSYLSKGLLAAEQAlkngrsrtyRFNFLKVVIVFAADyqgsgtsn 173 Caenorhabditis ele...
NP_496744  92 DLNqf----qSADDVYQTLfs----fLNEVSDsd-dSFLAKGLGMAESVlyngrmngvRENYNRLVVVYASAyredg--e 160 Caenorhabditis ele...
NP_499381 103 DLNni----tTADELSNTLfa----aLTWTSSve-hSYLQTGLKAADDLlakqsfntsRGHYQKLVIVYASEyrvsgt-q 172 Caenorhabditis ele...
NP_496746 112 DFYkl----qSYSDLSSQIqalsvtpLSRADE----TYIDTGLQAAINMinat--gglRDNYKKVVVLFTSKynyyh--t 179 Caenorhabditis ele...
NP_496745  89 DFYkl----qSWADLNSQIqr---lqYTPQSSsp-aSRMDTGLNAAIGMidat--agfRDNYKKIVIVFTSVhgsyks-n 157 Caenorhabditis ele...
NP_492949  90 TLNd-----yQFLDTNKMMd------QLKISSni-gSYLVTGLSGAEQLfkqd-kehsREHYRKVVIVFASTykddga-n 155 Caenorhabditis ele...
P34393    317 KPSdytnedeFTEDLWSDPr------LEDVDEksdeVNLHLGLQQAAKMta-----smRNGVRKVIVVYAASyndegn-d 384 Caenorhabditis ele...
Feature 1                                                  
NP_496256 172 naieLSRDLQSnGISIITVACTk--dSYALPRINmCATPGYAFVD 214 Caenorhabditis elegans
NP_496252 174 dafpIARRMKYdNTIIITVACTt--nQAALDGLAqISSPQFSLVD 216 Caenorhabditis elegans
NP_496744 161 dplnIAKRLRSsGVAIATVAFDpdgdGLLLSKLSkIASPNMSFKS 205 Caenorhabditis elegans
NP_499381 173 dplpLATRMKT-YLTIATVAYRqdivVGFNDALTkIASPGYNFTN 216 Caenorhabditis elegans
NP_496746 180 ypedLTDYLKStGVTIITVNTGgd-sYTTQSLRDkIASKGMAFAM 223 Caenorhabditis elegans
NP_496745 158 qprdVSKILKSrGIPVVTVNTGs--sSDTQAYLKqIASDNMSFAI 200 Caenorhabditis elegans
NP_492949 156 dpkpVAARFLSsGGIIITVAYSqshdTQLLEKLGgIATKEFNFTN 200 Caenorhabditis elegans
P34393    385 darqIAANIREtGYAIITVAFVepesSNLVMKIGeIASPRMNFTS 429 Caenorhabditis elegans

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