Conserved Protein Domain Family
vWA_C3HC4_type

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cd01466: vWA_C3HC4_type 
VWA C3HC4-type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Membes of this subgroup belong to Zinc-finger family as they are found fused to RING finger domains. The MIDAS motif is not conserved in all the members of this family. The function of vWA domains however is not known.
Statistics
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PSSM-Id: 238743
Aligned: 9 rows
Threshold Bit Score: 177.197
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
metal
Feature 1:metal ion-dependent adhesion site (MIDAS)
Evidence:
  • Comment:divalent cations are bound by the MIDAS motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # # #                                                                    
AAF13350    89 VDIVCVIDVSGSMQGe----------------------kIQLVQTTLNFMVERLSPADRICLISFSn-DATKISRLVQMS 145  Eufolliculina uh...
AAP03354    69 LDLIAVLDVSTSMAGn----------------------kLDRMKAALLFVIRKLADVDRLSIVTFSn-DAARLCPLRFVA 125  Japanese rice
EAA31281    69 CDIVLAIDVSGSMSAdapvpttasadytneqpehnglsvLDLVKHAARTIVSTLNSSDRLGIVTFSt-EAKVLQPLMPMT 147  Neurospora crassa
NP_179853  301 VDLVAVLDVSGRNSGg----------------------kLEMLKQTMRIVLSNLREMDRLSIIAFSs-SSKRLSPLRRMT 357  thale cress
BAB92788    68 LDLVAVIDVSGSMDGd----------------------rIDKVKTALQFVIRKLSDLDRLCIVTFCt-NATRLCPLRFVT 124  Japanese rice
EAA29374   622 VDVVVVVPISASMQGv----------------------kINLVRDALRFMVSSLGDRDRMGLVTFG--SSGGGVPVVGMT 677  Neurospora crassa
AAN05521   143 LDLVTVLDVSGSMAGr----------------------kLALVKKAMGFVIDNLGPADRLCVVSFSt-EASRRTRLLRMS 199  Japanese rice
BAC42427   325 IDLVTVLDLSNGGAN------------------------LQTVKHAMRSVISLLREMDRLSIVVFSt-GSKRLMPLRRMT 379  thale cress
NP_680410  317 GVGRRLLDPSQRAPVdlvvvvdv--------ggtmngakLQMVKRAMRLVISSLGSADRLSIVAVVmtVPKRLLPLKRMT 388  thale cress
Feature 1                                     #                              #                 
AAF13350   146 PKGKKQLKSMIPR------------LVASGGTNIVGGLEYGLQAl-rQRRTINQLSSIILLSDGQDNngttvlqrakatm 212  Eufolliculina uh...
AAP03354   126 GDAARADLGALVDg-----------LAADGNTNIRAGLEIGLAVaagRRLTAGRAVNVMLMSDGQQNr------------ 182  Japanese rice
EAA31281   148 ALNKKKTERNLGG------------MQPFSATNLWGGIVEGLKL---FDGQSGRMPALMVLTDGMPNhmcpa------qg 206  Neurospora crassa
NP_179853  358 ANGRRSARRIVDIitvpgsvsgvgiDFSGEGMSVNDALKKAVKVl-dDRRQKNPFTAVFVLTDRQAHqv----------- 425  thale cress
BAB92788   125 AAAQAELKALVDG------------LKAYGDTNMKGGLETGMSVvdgRSLAAGRAVSVMLMSDGYQNhgg---------- 182  Japanese rice
EAA29374   678 TKAWPGWSNVLASvk--------pvGQKSHRADVVEGANVAMDLl-mGRKYNNPIATIMLISDASTSdads--------v 740  Neurospora crassa
AAN05521   200 EVGKATAKRAVES------------LVDDSATNIGDGLRVAGRVl-gDRRHKNAVSSVILLSDGKDSy------------ 254  Japanese rice
BAC42427   380 AKGRRSARRMVDAlgg-------meTTGGVGMSVNDALKKAVKVv-eDRREKNPSTSIFVLSDGQDQp------------ 439  thale cress
NP_680410  389 EHGKRSAGAVVDG------------LLCGQGSNTSEALKKASRVl-eDRRERNPVASIVLLTDGQGQl------------ 443  thale cress
Feature 1                                                                           
AAF13350   213 dsIVIRDd----------------------YSVHTFGYGh----gHDSTLLNALAEPk---NGAFYYVK 252  Eufolliculina uhligi
AAP03354   183 -gDATRLdp-------------------ggVPVHTFGLGa----dHDPAVLQAIAGKs--rEGMFHYVA 225  Japanese rice
EAA31281   207 yvAKLRAmet------------------lpAAIHTFGFGy----sLRSGLLKSVAEIg---GGGYSFIP 250  Neurospora crassa
NP_179853  426 -aQLAHSr----------------------IPIHTIWLS------HAIPEDAFARTI----NGYLSLSV 461  thale cress
BAB92788   183 daRDVHLkn-------------------vpVYTFSFGAS------HDSNLLEAIARKs--lGGTFNYVA 224  Japanese rice
EAA29374   741 dfVVSRAea-------------------akITIHSFGLGt----tHKPDTMIELSTRt---KASYTYVK 783  Neurospora crassa
AAN05521   255 --VVPRRgngmsymdlvppsfassggrgqlAPIHTFGFGa----dHDAAAMNTIAESt---GGTFSFVE 314  Japanese rice
BAC42427   440 -eAVLKAklnatripfv---vsttrfsrpeIPVHSVYIAspgallHAPLRDAFTERIasllNVTLHNVK 504  thale cress
NP_680410  444 --SKVHTnqrstitnvg---strfahieipVTEHGFGESgg--csNAPAEEAFAKCI----GGLLSVVV 501  thale cress

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