Conserved Protein Domain Family
vWA_subgroup

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cd01465: vWA_subgroup 
VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.
Statistics
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PSSM-Id: 238742
Aligned: 15 rows
Threshold Bit Score: 200.577
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
metal
Feature 1:metal ion-dependent adhesion site (MIDAS)
Evidence:
  • Comment:divalent cations are bound by the MIDAS motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # # #                                                                    
P76481      215 SNLVFLIDTSGSMISDErLPLIQSSLKLLVKELREQDNIAIVTYAGDSRIALPSISGSHK-AEINAAIDS-LDAEGsTNG 292 Escherichia coli
NP_626954   184 AALTFVIDISGSMGEPGrLDLAQEALGTMTDRLRDDDSVALVTFSDEAETVLPMTRLGDHrGRVHDAIDG-LEPTDsTNL 262 Streptomyces coe...
NP_638263   249 ANLVFLVDVSGSMGAPDkLPLLQSSLKLLVRQLRKQDRITLVTYAGSTAVVLPPTSGAQQ-TRIVEAIDS-LQSGGgTAG 326 Xanthomonas camp...
NP_813376   252 SNLVFLIDVSGSMWGPTrLDLVKSSLKLLVNNLREKDKVAIVVYAGNASVKLESTPGSDK-QKIRDAIDE-LTSGGsTAG 329 Bacteroides thet...
Q55874       42 LNLCLVLDHSGSMDGQP-LETVKSAALGLIDRLEEDDRLSVIAFDHRAKIVIENQQVRNG-AAIAKAIER-LKAEGgTAI 118 Synechocystis sp...
ZP_00019796  43 LNLCFVLDRSGSMQGAK-LDNLKAATRRVIEQLQPTDIAAIVIFDDTVQTLIPATPVGDR-SALLAAVDS-ISEAGgTAM 119 Chloroflexus aur...
NP_406499   133 INLALVIDRSTSMSGER-IEKAREAAILAVNMLNITDTLSVVAYDNHAEVIIPATKVTDK-PALIASIQQhIHPRGmTAL 210 Yersinia pestis ...
ZP_00086384 193 ANLVFLVDVSGSMDRREgLPLVKSTLKLLVDQLREQDRVSLVVYAGESSVVLEPTSGREK-AKIRTAIER-LTAGGsTAG 270 Pseudomonas fluo...
ZP_00019272  44 LNLCLVIDRSSSMRGER-LQQVKQAAMQILDLLGDHESFALVTFNDRAEVVVSAQLARAR-AEIKRQISA-IEAAGgTEM 120 Chloroflexus aur...
ZP_00061518 183 SNLVFLIDVSGSMDEPNkLPLLKSAFKLLVDELDEDDRVSIVVYAGAAGLVLDSTPGNEK-DKILDALMN-LEAGGsTAG 260 Clostridium ther...
Feature 1        #                         #                                                    
P76481      293 GAGLELAYQQATKGFIKGGiNRILLATDGDFNVGIDDpKSIESMVKkq-reSGVTLSTFGVGnSNYNEAMMVRIADVGNG 371 Escherichia coli
NP_626954   263 GAGMETGYETAVEGRREGAtNRVVLVSDALANTGDTDaDTILERIAterreHGITLFGVGVG-SDYGDALMERLADKGDG 341 Streptomyces coe...
NP_638263   327 ASGIELAYKAAQQAYLRGGiNRILLATDGDFNVGVTDfDQLKGMVAek-rrSGVALSTLGFGtGNYNDTLMEQLADAGDG 405 Xanthomonas camp...
NP_813376   330 GAGIQLAYKVAKQNFLPKGnNRIILCSDGDFNVGVSSvEGLEQLIEke-rkSGVFLSVLGYGmGNYKDNKGQALAEKGNG 408 Bacteroides thet...
Q55874      119 DEGLKLGIQEAAKGKEDRV-SHIFLLTDGENEHGDND-RCLKLGTVas--dYKLTVHTLGFG-DHWNQDVLEAIAASAQG 193 Synechocystis sp...
ZP_00019796 120 SLGMQAGQVELQKHLGSDRlSRMLLLTDGQTWGDEPLcRDLARSLGq----AGVQIVAFGLG-TEWNEQLLDDIAAASNG 194 Chloroflexus aur...
NP_406499   211 FAGVSMGIGQVDKHLNREQvNRIILISDGQANTGPTSiSELSDLARma-akKGIAITTIGLG-QDYNEDLMTAIAGYSDG 288 Yersinia pestis ...
ZP_00086384 271 ASGIELAYQMAQQAFIPKGiNRILLATDGDFNVGTSDfDSLKQMAVdk-rkTGISLTTLGFGvDNYNEHLMEQLADAGDG 349 Pseudomonas fluo...
ZP_00019272 121 ATGLALGVQELQRAMMPRAvHRLLLLTDGRTYGDEGRcVEIARRAQs----RGIGITALGIG-SEWNEDLLETIAARENS 195 Chloroflexus aur...
ZP_00061518 261 AEGIKLAYDVAKKNFIKSGnNRVILATDGDFNVGISSeAELVRLIEkk-rdEGIFLTVLGFGtGNYKDSKMESLADKGNG 339 Clostridium ther...
Feature 1                      
P76481      372 NYSYIDTLSEAQKVL 386 Escherichia coli
NP_626954   342 HTTYVSTTEDAREVF 356 Streptomyces coelicolor A3(2)
NP_638263   406 AYAYIDSALEARKVL 420 Xanthomonas campestris pv. campestris str. ATCC 33913
NP_813376   409 NHAYIDNLQEANRVL 423 Bacteroides thetaiotaomicron VPI-5482
Q55874      194 SLSYIENPSEALHTF 208 Synechocystis sp. PCC 6803
ZP_00019796 195 YSDYIAAPEQIGTFF 209 Chloroflexus aurantiacus
NP_406499   289 NHTFVANSADLEKAF 303 Yersinia pestis CO92
ZP_00086384 350 NYAYIDNLREARKVL 364 Pseudomonas fluorescens PfO-1
ZP_00019272 196 RTHYITSAAEITKIF 210 Chloroflexus aurantiacus
ZP_00061518 340 NYAYIDNIAEARKVL 354 Clostridium thermocellum ATCC 27405

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