Conserved Protein Domain Family
vWA_ORF176_type

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cd01457: vWA_ORF176_type 
VWA ORF176 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. The members of this subgroup are Eubacterial in origin and have a conserved MIDAS motif. Not much is known about the biochemistry of these.
Statistics
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PSSM-Id: 238734
Aligned: 5 rows
Threshold Bit Score: 256.265
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
metal
Feature 1:metal ion-dependent adhesion site (MIDAS)
Evidence:
  • Comment:divalent cations are bound by the MIDAS motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # # #                                                                  
NP_442298   8 ENRDYTLMIDKSSSMATAdd----------pnGPTRWEIAQASTIALAKKCEEIDSDGITVYLFSGRFRRYDNVT--AEK 75  Synechocystis sp. ...
NP_486149   8 ENRDYTLVIDHSASMAKPdg----------nsENSKWQAIQESTFALARKCEEFDSDGITVYLFSKTFQRYDYVN--SAK 75  Nostoc sp. PCC 7120
NP_441472   3 NQRDYTLIIDKSGSMSIIep----------kfQKSRWELVQESTLALARKCDQLDANGITVYTFSGKFRRYDNVN--ASK 70  Synechocystis sp. ...
EAA29626  463 SKFDVVFLLDDTGSMMEAiepapsingnceakERSKWDEMIESLRYIVDIVTHYDRDGVDVHFLYRDDKDEFRIQngQRV 542 Neurospora crassa
NP_077661  54 LARQYVLLIDRSGSMGWAd------------gSTTRWESARKAVEKLVEAAFIYDTDHRVPVYLFDDKVEFVGECtsSSQ 121 Ectocarpus silicul...
Feature 1                     #                                            #                  
NP_442298  76 VAYIYANNEPm---gRTDLAGALKDGLDN-FFQRRQAg-------QTKPn---GETFLIITDGEPTDRKAVIRLILe--- 138 Synechocystis sp. ...
NP_486149  76 VKQLFAENSPs---eTTNLVGVLQDAINS-YFQRKSLg-------KTKPa---GEVILVITDGAPVDSQAVCEVIIk--- 138 Nostoc sp. PCC 7120
NP_441472  71 VEQIFQENEPv---gGTNLTAVLQDALNN-FLQRKKS--------NQAPt---GETILVITDGEPNDRRSVFEIIIq--- 132 Synechocystis sp. ...
EAA29626  543 LDLLTNEVSPdeiggGTFIAERLWTILTA-YIDRFENyrlrmaerAPCPekpkMLNLIVITDGAADDKDAVEDVIVnaa- 620 Neurospora crassa
NP_077661 122 VVDVFKNYQPr----GTTDLAQCLEVAMEeYAGRKRPn------yEVCP----GTTFIVVLDGCADDKDAVKRVLRkfsd 187 Ectocarpus silicul...
Feature 1                                                                                     
NP_442298 139 -aSQKIDRd-eELAISLIQVGRDKKATAFFQALDDQlqaAGAKFDIVDTVTMe--------DMQGMSLs--dVLLKAITD 206 Synechocystis sp. ...
NP_486149 139 --ATHLVEsanELRISIIQVGSDSHATKFLKALDDHlqsVGAKFDICDTITL---------DELEITNls-dVLMKAITD 206 Nostoc sp. PCC 7120
NP_441472 133 -aSKCLDAd-eELAISFMQIGNDPSATKFLQALDDQlmeVGAKFDIVDTVTFd--------EMEDLTLt--eVLLNAIED 200 Synechocystis sp. ...
EAA29626  621 rrLDELRAlpnQVGIQFLQIGRNEAASRWLKTLDDDlneKHRVRDMVDTRPWdrvdeidksLQERLTN----ILLGGIDR 696 Neurospora crassa
NP_077661 188 pvSGYVANh-tQLAISFLQIADDPGATAFLNELDRG---FVGSPDIVDTKKD---------DILSLPGgidkLFHDAIFD 254 Ectocarpus silicul...

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